RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 IFI27L2Q9H2X8 130 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
PDLIM7-201ENST00000355572 SLC17A2O00624 439 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 LANCL1O43813 399 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 BPNT1O95861 308 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 MOSP00540 346 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 UBBP0CG47 229 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 CD33P20138 364 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 OR10A3P58181 314 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 RPL23AP62750 156 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 CFHR3Q02985 330 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 NABP2Q9BQ15 211 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 ABHD14AQ9BUJ0 271 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 LIN7CQ9NUP9 197 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 OR1A1Q9P1Q5 309 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 JPT1Q9UK76 154 aa13.14□□□□□ -0.31
PDLIM7-201ENST00000355572 SAA2-SAA4A0A096LPE2 208 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 LDLRAD4O15165 306 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 ST8SIA5O15466 376 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 YPEL1O60688 119 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 PF4P02776 101 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 SAA2P0DJI9 122 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 IL3RAP26951 378 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 HTD2P86397 168 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 TRAT1Q6PIZ9 186 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 MRPL41Q8IXM3 137 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 CHPT1Q8WUD6 406 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 YPEL2Q96QA6 119 aa13.13□□□□□ -0.31
PDLIM7-201ENST00000355572 A0A0B4J203 849 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 IGKV1-6A0A0C4DH72 117 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 PROP1O75360 226 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 THBS3P49746 956 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 LINC00205P59089 165 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 MOGAT2Q3SYC2 334 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 RPL39P5Q59GN2 51 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 HES5Q5TA89 166 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 ZNF833PQ6ZTB9 187 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 ZNF554Q86TJ5 538 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 Q9H521 79 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 KCNIP1Q9NZI2 227 aa13.12□□□□□ -0.31
PDLIM7-201ENST00000355572 TMEM272A0A1B0GTI8 110 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 SCTP09683 121 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 VEGFCP49767 419 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 TBCEQ15813 527 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 STEAP3Q658P3 488 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 GALMQ96C23 342 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 ARHGAP5-AS1Q96IT6 56 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 PECRQ9BY49 303 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 ACOT13Q9NPJ3 140 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 NECAP2Q9NVZ3 263 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 ZNF107Q9UII5 783 aaPredicted RBP13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 KCNK7Q9Y2U2 307 aa13.11□□□□□ -0.31
PDLIM7-201ENST00000355572 K7EIL1 84 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 ARSBP15848 533 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 ACTBP60709 375 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 NDPQ00604 133 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 C2orf76Q3KRA6 126 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 MRAPQ8TCY5 172 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 RAX2Q96IS3 184 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 P2RX4Q99571 388 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 PLEKHJ1Q9NW61 149 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 RAB26Q9ULW5 256 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
PDLIM7-201ENST00000355572 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 WI2-2373I1.2A0A1W2PRP0 233 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 AP4M1O00189 453 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 TXNL1O43396 289 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 CD3GP09693 182 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 CT45A6P0DMU7 189 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 CT45A5P0DMU8 189 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 CT45A7P0DMV0 189 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 MMDQ15546 238 aa13.09□□□□□ -0.31
PDLIM7-201ENST00000355572 RAB11BQ15907 218 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms