RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PDGFBP01127 241 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 CCL1P22362 96 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 CCNOP22674 350 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 KLF3P57682 345 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 SELENOTP62341 195 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 ZNF266Q14584 549 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 FAM90A2PQ658T7 463 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 PMS2CLQ68D20 193 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 RPS19BP1Q86WX3 136 aaKnown RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 OR2C3Q8N628 320 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 SLC24A4Q8NFF2 622 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 RNF138Q8WVD3 245 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 NABP1Q96AH0 204 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 IMMP2LQ96T52 175 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 OR51I2Q9H344 312 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 LIME1Q9H400 295 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 P4HTMQ9NXG6 502 aa8.05□□□□□ -1.12
SMG6-202ENST00000354901 ERRFI1Q9UJM3 462 aaPredicted RBP8.05□□□□□ -1.12
SMG6-202ENST00000354901 IGLV3-32A0A0A0MS00 114 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 VAMP5O95183 116 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 TDGF1P13385 188 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 EGR1P18146 543 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 DTYMKP23919 212 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 OTX2P32243 289 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 NTF4P34130 210 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 SSR4P51571 173 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 IL15RAQ13261 267 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 ZNF506Q5JVG8 444 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 MRPL14Q6P1L8 145 aaKnown RBP8.04□□□□□ -1.12
SMG6-202ENST00000354901 SAXO1Q8IYX7 474 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 FAM89BQ8N5H3 189 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 OR56B2PQ8NGI1 322 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 SAP25Q8TEE9 199 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 TMEM171Q8WVE6 324 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 SPTSSAQ969W0 71 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 ZNF703Q9H7S9 590 aaPredicted RBP8.04□□□□□ -1.12
SMG6-202ENST00000354901 PRSS50Q9UI38 385 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 TRBV24-1A0A075B6N3 115 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 RAB29O14966 203 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 CXCL13O43927 109 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 LIFP15018 202 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 ZNF32P17041 273 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 LPAL2Q16609 132 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 BAGE3Q86Y29 109 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 BAGE2Q86Y30 109 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 GCNT2Q8N0V5 402 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 ZIC4Q8N9L1 334 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 OR2T10Q8NGZ9 312 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 MAFAQ8NHW3 353 aaPredicted RBP8.04□□□□□ -1.12
SMG6-202ENST00000354901 PIGCQ92535 297 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 BORCS8Q96FH0 119 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 PLK3Q9H4B4 646 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 MANBALQ9NQG1 85 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 ADAMTS20P59510 1910 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 IGKV1-27A0A075B6S5 117 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 SERPINE3A8MV23 424 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 NDUFB8O95169 186 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 UCP2P55851 309 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 TMEM267Q0VDI3 215 aaPredicted RBP8.04□□□□□ -1.12
SMG6-202ENST00000354901 FBXL14Q8N1E6 418 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 SSC4DQ8WTU2 575 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 PP6455Q8WZ26 134 aa8.04□□□□□ -1.12
SMG6-202ENST00000354901 NUDT16L1Q9BRJ7 211 aaKnown RBP8.04□□□□□ -1.12
SMG6-202ENST00000354901 IGHV1-45A0A0A0MS14 117 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 MSTNO14793 375 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 DKK1O94907 266 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 IL24Q13007 206 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 SPATA45Q537H7 98 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 ZC2HC1AQ96GY0 325 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 HIPK2Q9H2X6 1198 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 RBKSQ9H477 322 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 VSIRQ9H7M9 311 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 PROK2Q9HC23 129 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 SDF2L1Q9HCN8 221 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 OR6C3Q9NZP0 311 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 ANXA10Q9UJ72 324 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 ESPL1Q14674 2120 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 LOC102723971A0A1B0GUV8 181 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 HSPB6O14558 160 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 RFPL3SP0C7P2 107 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 PMCHP20382 165 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 SUCLG1P53597 346 aaKnown RBP8.03□□□□□ -1.12
SMG6-202ENST00000354901 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
SMG6-202ENST00000354901 FBLN7Q53RD9 439 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 FGFBP3Q8TAT2 258 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 PILRBQ9UKJ0 227 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 ANAPC10Q9UM13 185 aa8.03□□□□□ -1.12
SMG6-202ENST00000354901 A0A0U1RQV5 110 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 ZNF816-ZNF321PA0A0X1KG74 233 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 MAP1LC3B2A6NCE7 125 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 NKX2-6A6NCS4 301 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 LAMTOR5O43504 91 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 SPINK4O60575 86 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 TNFSF13O75888 250 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 ZNF728P0DKX0 622 aa8.02□□□□□ -1.12
SMG6-202ENST00000354901 BCL2P10415 239 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms