RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 CELP19835 753 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 HTD2P86397 168 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF260Q3ZCT1 412 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 C6orf141Q5SZD1 244 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 YPEL2Q96QA6 119 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 UQCC2Q9BRT2 126 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 OR51J1Q9H342 316 aa11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 CNOT2Q9NZN8 540 aaKnown RBP11.25□□□□□ -0.61
PRPF40A-201ENST00000354363 IGHV7-81A0A0B4J1V7 117 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 NBR2O15453 112 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 IGLV1-40P01703 118 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 OR3A3P47888 321 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 RUNX1Q01196 453 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 TMEM65Q6PI78 240 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF833PQ6ZTB9 187 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 SULT4A1Q9BR01 284 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 PARP11Q9NR21 331 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 GHRLQ9UBU3 117 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF256Q9Y2P7 627 aaPredicted RBP11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 HUWE1Q7Z6Z7 4374 aaKnown RBP11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 RGS11O94810 467 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 WNT4P56705 351 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 GNB1P62873 340 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 HMGN3Q15651 99 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 C5orf64Q2M2E5 130 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 PACRGLQ8N7B6 248 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 NPBQ8NG41 125 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 GALMQ96C23 342 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 OR5B12Q96R08 314 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 CST11Q9H112 138 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 C8orf4Q9NR00 106 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 PSORS1C1Q9UIG5 152 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 VSIG4Q9Y279 399 aa11.24□□□□□ -0.61
PRPF40A-201ENST00000354363 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 TRAV41A0A0B4J266 112 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 MYL12BO14950 172 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 CHATP28329 748 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 RAB9AP51151 201 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 AHSA2Q719I0 299 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 THRSPQ92748 146 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 ASCL2Q99929 193 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 IFI27L2Q9H2X8 130 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
PRPF40A-201ENST00000354363 EBAG9O00559 213 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 NDUFA3O95167 84 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 GNAO1P09471 354 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 INSL3P51460 131 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 INSL4Q14641 139 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 OR10K2Q6IF99 312 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 C8orf59Q8N0T1 100 aaPredicted RBP11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 NANOGP1Q8N7R0 232 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 MINDY2Q8NBR6 621 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 FAAP24Q9BTP7 215 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 PLCXD1Q9NUJ7 323 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 KIAA1456Q9P272 454 aa11.22□□□□□ -0.61
PRPF40A-201ENST00000354363 UBBP0CG47 229 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 RPS27AP62979 156 aaKnown RBP11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 NDPQ00604 133 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 C19orf54Q5BKX5 351 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 FAM27D1Q5T7N8 215 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 FBLIM1Q8WUP2 373 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 DCUN1D4Q92564 292 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 FBXO7Q9Y3I1 522 aa11.21□□□□□ -0.61
PRPF40A-201ENST00000354363 DNAH7Q8WXX0 4024 aa11.21□□□□□ -0.62
PRPF40A-201ENST00000354363 ST8SIA5O15466 376 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 LY86O95711 162 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 CRIP2P52943 208 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ACSM3Q53FZ2 586 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 C1orf100Q5SVJ3 147 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 FAM131AQ6UXB0 335 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 LRRTM1Q86UE6 522 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 SVOPQ8N4V2 548 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 IL1F10Q8WWZ1 152 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 TMEM59Q9BXS4 323 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ALX4Q9H161 411 aaPredicted RBP11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 KCNK15Q9H427 330 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 FKBP14Q9NWM8 211 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 ABRACLQ9P1F3 81 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 STEAP1Q9UHE8 339 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 OVOL1O14753 267 aa11.2□□□□□ -0.62
PRPF40A-201ENST00000354363 SOX15O60248 233 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms