RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 MRPL20Q9BYC9 149 aaKnown RBP10.47□□□□□ -0.73
CLCC1-202ENST00000348264 LPAR5Q9H1C0 372 aa10.47□□□□□ -0.73
CLCC1-202ENST00000348264 VCX3BQ9H321 246 aa10.47□□□□□ -0.73
CLCC1-202ENST00000348264 PLGRKTQ9HBL7 147 aa10.47□□□□□ -0.73
CLCC1-202ENST00000348264 NECAP2Q9NVZ3 263 aa10.47□□□□□ -0.73
CLCC1-202ENST00000348264 AK6Q9Y3D8 172 aaKnown RBP10.47□□□□□ -0.73
CLCC1-202ENST00000348264 FOXI3A8MTJ6 420 aaPredicted RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 AP4M1O00189 453 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 SOCS1O15524 211 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 YPEL1O60688 119 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 CALRP27797 417 aaKnown RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 OR3A3P47888 321 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 HSPA13P48723 471 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 CLDN12P56749 244 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 TRAM1Q15629 374 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 TBCEQ15813 527 aaPredicted RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 ZNF880Q6PDB4 577 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 REC114Q7Z4M0 266 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 GALMQ96C23 342 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 YPEL2Q96QA6 119 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 PARP12Q9H0J9 701 aaKnown RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 IFI27L2Q9H2X8 130 aa10.46□□□□□ -0.73
CLCC1-202ENST00000348264 CHMP1AQ9HD42 196 aaPredicted RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 AURKAIP1Q9NWT8 199 aaPredicted RBP10.46□□□□□ -0.73
CLCC1-202ENST00000348264 SAA2-SAA4A0A096LPE2 208 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ST8SIA5O15466 376 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ARL6IP5O75915 188 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 RGS11O94810 467 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 SAA2P0DJI9 122 aaPredicted RBP10.45□□□□□ -0.74
CLCC1-202ENST00000348264 SLC2A2P11168 524 aaPredicted RBP10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ARSBP15848 533 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 SLC35B1P78383 322 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 RAB11BQ15907 218 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 SSX1Q16384 188 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 LY6G6FQ5SQ64 297 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ZNF833PQ6ZTB9 187 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 C8orf86Q6ZUL3 223 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ZNF367Q7RTV3 350 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
CLCC1-202ENST00000348264 FAM89BQ8N5H3 189 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 COMMD1Q8N668 190 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 KLHL30-AS1Q8NEE0 82 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 OR2AK2Q8NG84 335 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 OR8H1Q8NGG4 311 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 SETD6Q8TBK2 473 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 IL1F10Q8WWZ1 152 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 RASL11BQ9BPW5 248 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 NABP2Q9BQ15 211 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 PLEKHJ1Q9NW61 149 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 ABRACLQ9P1F3 81 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 AK3Q9UIJ7 227 aa10.45□□□□□ -0.74
CLCC1-202ENST00000348264 TRBV6-6A0A0A6YYG2 114 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 NUDT19A8MXV4 375 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 CNTFRP26992 372 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 SOX6P35712 828 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 THBS3P49746 956 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 PLA2G7Q13093 441 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 MMDQ15546 238 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 OR51D1Q8NGF3 324 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 MRAPQ8TCY5 172 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 FAM3DQ96BQ1 224 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 RCC1LQ96I51 464 aaKnown RBP10.44□□□□□ -0.74
CLCC1-202ENST00000348264 RITA1Q96K30 269 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 URM1Q9BTM9 101 aaKnown RBP10.44□□□□□ -0.74
CLCC1-202ENST00000348264 LRRC42Q9Y546 428 aa10.44□□□□□ -0.74
CLCC1-202ENST00000348264 SHISA3A0PJX4 238 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 LDLRAD4O15165 306 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 RPLP1P05386 114 aaKnown RBP10.43□□□□□ -0.74
CLCC1-202ENST00000348264 VEGFCP49767 419 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 TMEM50BP56557 158 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ACTBP60709 375 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 HLA-DRB3P79483 266 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 CFHR3Q02985 330 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 PNLIPRP3Q17RR3 467 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 HES5Q5TA89 166 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 TEX38Q6PEX7 206 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ARHGAP5-AS1Q96IT6 56 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ZNF251Q9BRH9 671 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ACOT13Q9NPJ3 140 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ZFP57Q9NU63 452 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 OR1A1Q9P1Q5 309 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 STEAP1Q9UHE8 339 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 ZNF107Q9UII5 783 aaPredicted RBP10.43□□□□□ -0.74
CLCC1-202ENST00000348264 BLOC1S6Q9UL45 172 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 HSF4Q9ULV5 492 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 RAB26Q9ULW5 256 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 V9GY05 133 aa10.43□□□□□ -0.74
CLCC1-202ENST00000348264 TMEM272A0A1B0GTI8 110 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 RRP9O43818 475 aaKnown RBP10.42□□□□□ -0.74
CLCC1-202ENST00000348264 OR10A3P58181 314 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 RPL39P5Q59GN2 51 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 PLAC9Q5JTB6 97 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 FAM131AQ6UXB0 335 aa10.42□□□□□ -0.74
CLCC1-202ENST00000348264 ZNF695Q8IW36 515 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms