RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NMBP08949 121 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 HOGA1Q86XE5 327 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 MRGPRDQ8TDS7 321 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 NPVFQ9HCQ7 196 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 TCFL5Q9UL49 500 aa17.01■□□□□ 0.31
HDAC4-201ENST00000345617 SOX21Q9Y651 276 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-201ENST00000345617 TRGV5A0A0B4J1U4 118 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 C17orf51A8MQB3 221 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 CLEC1BQ9P126 229 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 TRAV9-1A0A075B6T8 112 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 LGALS3P17931 250 aaKnown RBP17■□□□□ 0.31
HDAC4-201ENST00000345617 TNXAQ16473 311 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 ALG14Q96F25 216 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 MSRB3Q8IXL7 192 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 OR8G5Q8NG78 346 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 USF3Q68DE3 2245 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 A0A1W2PQD3 144 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 SS18L1O75177 396 aaPredicted RBP17■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF32P17041 273 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 ATP6V0CP27449 155 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 HSF4Q9ULV5 492 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 SIGLEC5O15389 551 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 MRPS11P82912 194 aaKnown RBP17■□□□□ 0.31
HDAC4-201ENST00000345617 GAB4Q2WGN9 574 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 MRPL16Q9NX20 251 aaKnown RBP17■□□□□ 0.31
HDAC4-201ENST00000345617 IGHV3-64DA0A0J9YX35 117 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 RNF133Q8WVZ7 376 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 RARRES2Q99969 163 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 EIF3GO75821 320 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC4-201ENST00000345617 MGPP08493 103 aa17■□□□□ 0.31
HDAC4-201ENST00000345617 TRGC2P03986 189 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 GLIPR1P48060 266 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 GGTLC2Q14390 218 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 HES3Q5TGS1 186 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 LRRC29Q8WV35 223 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 TREM2Q9NZC2 230 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 HINT1P49773 126 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-201ENST00000345617 MED19A0JLT2 244 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-201ENST00000345617 TMEM30BQ3MIR4 351 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 UBE2L6O14933 153 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 LDLRAD3Q86YD5 345 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 A0A0U1RQV5 110 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 A0A1B0GW15 77 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 QTRT1Q9BXR0 403 aaKnown RBP16.99■□□□□ 0.31
HDAC4-201ENST00000345617 SGK494Q96LW2 274 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 HELZP42694 1942 aaKnown RBP16.99■□□□□ 0.31
HDAC4-201ENST00000345617 HARBI1Q96MB7 349 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 TMEM222Q9H0R3 208 aa16.99■□□□□ 0.31
HDAC4-201ENST00000345617 VENTXO95231 258 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 CD74P04233 296 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 SRD5A2P31213 254 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF683Q8IZ20 524 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 ZCCHC14Q8WYQ9 949 aaKnown RBP16.98■□□□□ 0.31
HDAC4-201ENST00000345617 FAM53AQ6NSI3 398 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-201ENST00000345617 TEX29Q8N6K0 151 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 FADS6Q8N9I5 356 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 OR10D3Q8NH80 312 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 MRPL18Q9H0U6 180 aaKnown RBP16.98■□□□□ 0.31
HDAC4-201ENST00000345617 NKX2-6A6NCS4 301 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 NDUFS8O00217 210 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 RELQ04864 619 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-201ENST00000345617 HMGCLL1Q8TB92 370 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 MS4A7Q9GZW8 240 aaPredicted RBP16.98■□□□□ 0.31
HDAC4-201ENST00000345617 OR51B2Q9Y5P1 312 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 HPRT1P00492 218 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 AGAP20933 346 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 LRRC75BQ2VPJ9 315 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 WNK1Q9H4A3 2382 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 FSTP19883 344 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 ANKRD37Q7Z713 158 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 C8orf44Q96CB5 159 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 TMEM189A5PLL7 270 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 NIT1Q86X76 327 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
HDAC4-201ENST00000345617 SPINK9Q5DT21 86 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 LCN2P80188 198 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 C10orf128Q5T292 105 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 SCNM1Q9BWG6 230 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 TMEM30AQ9NV96 361 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 CDK2AP1O14519 115 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 HYPMO75409 117 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 A0A1W2PS18 150 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-201ENST00000345617 OR4D9Q8NGE8 314 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 MEF2CQ06413 473 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-201ENST00000345617 H0Y8X5 98 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 ZNF324O75467 553 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-201ENST00000345617 HOXB1P14653 301 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-201ENST00000345617 A0A1W2PQM1 296 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 OR10S1Q8NGN2 331 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 RAB1CQ92928 201 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 WNT16Q9UBV4 365 aa16.97■□□□□ 0.31
HDAC4-201ENST00000345617 F2RL2O00254 374 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 FFAR1O14842 300 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 PSG9Q00887 426 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 TCTN1Q2MV58 587 aa16.96■□□□□ 0.31
HDAC4-201ENST00000345617 TP53I13Q8NBR0 393 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-201ENST00000345617 C6orf106Q9H6K1 298 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-201ENST00000345617 CEACAM5P06731 702 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms