RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RAB7AP51149 207 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 TAS2R20P59543 309 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 MORN2Q502X0 79 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 BAIAP2L2Q6UXY1 529 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 IZUMO1Q8IYV9 350 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 OR52L2PQ8NGH6 319 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 OR10V1Q8NGI7 309 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 OR4P4Q8NGL7 312 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 ZFAND2BQ8WV99 257 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 NUDCD2Q8WVJ2 157 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 LEAP2Q969E1 77 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 GINS4Q9BRT9 223 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
SNCA-202ENST00000345009 MMP27Q9H306 513 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 SCPEP1Q9HB40 452 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 IFT46Q9NQC8 304 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 SLC23A1Q9UHI7 598 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 ZNF230Q9UIE0 474 aaPredicted RBP9.6□□□□□ -0.87
SNCA-202ENST00000345009 HILPDAQ9Y5L2 63 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 A3GALT2U3KPV4 340 aa9.6□□□□□ -0.87
SNCA-202ENST00000345009 DPPA5A6NC42 116 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 VGLL3A8MV65 326 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 GAPDHP04406 335 aaKnown RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 SCTP09683 121 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 IER3P46695 156 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 CNIH2Q6PI25 160 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 SLC25A48Q6ZT89 311 aaKnown RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 LHFPL4Q7Z7J7 247 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 FAM216AQ8WUB2 273 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 TOMM40LQ969M1 308 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 DIRAS2Q96HU8 199 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 ZNF48Q96MX3 618 aaPredicted RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 SSX3Q99909 188 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 DCUN1D5Q9BTE7 237 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 SLIRPQ9GZT3 109 aaKnown RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 ZNRD1Q9P1U0 126 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 EXTL2Q9UBQ6 330 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 PITPNC1Q9UKF7 332 aa9.59□□□□□ -0.87
SNCA-202ENST00000345009 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
SNCA-202ENST00000345009 MDFIC2A0A1B0GVS7 189 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 SULT1C2O00338 296 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 CTDSP2O14595 271 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 BET1O15155 118 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 TXNL1O43396 289 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 CRYBA1P05813 215 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 GSTT2P0CG29 244 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 GSTT2BP0CG30 244 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 DYNLT3P51808 116 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 ARPC4P59998 168 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 CT45A1Q5HYN5 189 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 TPTE2P1Q5T6R2 138 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 HOGA1Q86XE5 327 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 PRIMA1Q86XR5 153 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 OR8H3Q8N146 312 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 DTX3Q8N9I9 347 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 BEST4Q8NFU0 473 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 CT45A3Q8NHU0 189 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 TMEM158Q8WZ71 300 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 GCDHQ92947 438 aaPredicted RBP9.58□□□□□ -0.88
SNCA-202ENST00000345009 S1PR3Q99500 378 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 ABHD14AQ9BUJ0 271 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 RAB18Q9NP72 206 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 BATF3Q9NR55 127 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 ANXA10Q9UJ72 324 aa9.58□□□□□ -0.88
SNCA-202ENST00000345009 ELF5Q9UKW6 265 aaPredicted RBP9.58□□□□□ -0.88
SNCA-202ENST00000345009 TRBV6-7A0A0A0MS04 114 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 A0A1W2PPE3 182 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 LY6LH3BQJ8 138 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 RAB29O14966 203 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 SSX5O60225 188 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 HLA-DQB1P01920 261 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 OR3A3P47888 321 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 RPL15P61313 204 aaKnown RBP9.57□□□□□ -0.88
SNCA-202ENST00000345009 MRPS10P82664 201 aaKnown RBP9.57□□□□□ -0.88
SNCA-202ENST00000345009 C16orf87Q6PH81 154 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 SNX29P2Q8IUI4 249 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 LYG1Q8N1E2 194 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 C17orf50Q8WW18 174 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 CAPSLQ8WWF8 208 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 MAFIPQ8WZ33 124 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 AJUBAQ96IF1 538 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 CYYR1Q96J86 154 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 CABLES2Q9BTV7 478 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 NXF2Q9GZY0 626 aaKnown RBP9.57□□□□□ -0.88
SNCA-202ENST00000345009 NECAP2Q9NVZ3 263 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 ZNF221Q9UK13 617 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 RBM7Q9Y580 266 aaKnown RBP9.57□□□□□ -0.88
SNCA-202ENST00000345009 COL6A5A8TX70 2615 aa9.57□□□□□ -0.88
SNCA-202ENST00000345009 H3BUX3 64 aa9.56□□□□□ -0.88
SNCA-202ENST00000345009 HSD17B6O14756 317 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms