RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 A0A0A6YYD4 124 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 TRAV1-2A0A0B4J238 106 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 PPP1CCP36873 323 aaKnown RBP12.77□□□□□ -0.36
ATG4B-201ENST00000344376 ZNF134P52741 427 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 EBI3Q14213 229 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 GNMTQ14749 295 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 HMGN3Q15651 99 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 FAM89BQ8N5H3 189 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 OR56B1Q8NGI3 324 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 FCGR1BQ92637 280 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 R3HDM4Q96D70 268 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 CYYR1Q96J86 154 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 EAF1Q96JC9 268 aaPredicted RBP12.77□□□□□ -0.36
ATG4B-201ENST00000344376 STEAP1Q9UHE8 339 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 MGAT4AQ9UM21 535 aa12.77□□□□□ -0.36
ATG4B-201ENST00000344376 CMYA5Q8N3K9 4069 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 TRDV1A0A1B0GX56 115 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.37
ATG4B-201ENST00000344376 SOCS1O15524 211 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 LANCL1O43813 399 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 YPEL1O60688 119 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 NAPSAO96009 420 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 MOSP00540 346 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 GALP22466 123 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 PSMB9P28065 219 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 CLDN12P56749 244 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 LY6G6FQ5SQ64 297 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 HES5Q5TA89 166 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 CD200R1LQ6Q8B3 271 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 OR2AK2Q8NG84 335 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 YPEL2Q96QA6 119 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 BCL7BQ9BQE9 202 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 HSF4Q9ULV5 492 aa12.77□□□□□ -0.37
ATG4B-201ENST00000344376 TCRBV4S1A1TA0A5B7 111 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 WIPF1O43516 503 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 VEGFCP49767 419 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 TMBIM6P55061 237 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 CD83Q01151 205 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 C2orf76Q3KRA6 126 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 UBE2UQ5VVX9 321 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 OR8H1Q8NGG4 311 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 AK3Q9UIJ7 227 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 RAB22AQ9UL26 194 aa12.76□□□□□ -0.37
ATG4B-201ENST00000344376 TSSC4Q9Y5U2 329 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-201ENST00000344376 TRBV6-6A0A0A6YYG2 114 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 PSMB11A5LHX3 300 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 SERPINE3A8MV23 424 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 NOL3O60936 208 aaKnown RBP12.75□□□□□ -0.37
ATG4B-201ENST00000344376 MRPS15P82914 257 aaKnown RBP12.75□□□□□ -0.37
ATG4B-201ENST00000344376 KHDC1LQ5JSQ8 128 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 ZNF880Q6PDB4 577 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 SLC35E3Q7Z769 313 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 CLVS1Q8IUQ0 354 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-201ENST00000344376 FOXRED2Q8IWF2 684 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 Q8N6K4 173 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 CHPT1Q8WUD6 406 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 ISOC1Q96CN7 298 aa12.75□□□□□ -0.37
ATG4B-201ENST00000344376 PF4V1P10720 104 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 RAB3BP20337 219 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 NEDD8Q15843 81 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 C22orf42Q6IC83 251 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 ARHGAP5-AS1Q96IT6 56 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
ATG4B-201ENST00000344376 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
ATG4B-201ENST00000344376 TMEM272A0A1B0GTI8 110 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 IFITM5A6NNB3 132 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 FOXI3A8MTJ6 420 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-201ENST00000344376 ADARB2-AS1A8MUL3 147 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 LDLRAD4O15165 306 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 KCNAB3O43448 404 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 IGHG2P01859 326 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 OR10A3P58181 314 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 SLC35B1P78383 322 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 HLA-DRB3P79483 266 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 C5orf24Q7Z6I8 188 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 RAB2BQ8WUD1 216 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 CMSS1Q9BQ75 279 aaKnown RBP12.73□□□□□ -0.37
ATG4B-201ENST00000344376 PECRQ9BY49 303 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 ZNF736B4DX44 427 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-201ENST00000344376 HSPA12AO43301 675 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 GADD45AP24522 165 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 FAM71F2Q6NXP2 309 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 S1PR3Q99500 378 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 HDHD3Q9BSH5 251 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-201ENST00000344376 ABCG5Q9H222 651 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 PIPOXQ9P0Z9 390 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 STUB1Q9UNE7 303 aa12.73□□□□□ -0.37
ATG4B-201ENST00000344376 SAA2-SAA4A0A096LPE2 208 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 AP4M1O00189 453 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 CD3GP09693 182 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 SAA2P0DJI9 122 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-201ENST00000344376 ZBTB25P24278 435 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 GPR12P47775 334 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 TMEM50BP56557 158 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-201ENST00000344376 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
ATG4B-201ENST00000344376 ZNF833PQ6ZTB9 187 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms