RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 RAB18Q9NP72 206 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 SLC2A9Q9NRM0 540 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
HERPUD1-202ENST00000344114 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 FGL1Q08830 312 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 GSG1LQ6UXU4 331 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 KCTD9Q7L273 389 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 CD177Q8N6Q3 437 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 ZNF565Q8N9K5 539 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 OR11H4Q8NGC9 324 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 COQ2Q96H96 371 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 VRK1Q99986 396 aaPredicted RBP11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 PDCD10Q9BUL8 212 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 SUCNR1Q9BXA5 334 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 KIF25Q9UIL4 384 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 PPP1R3CQ9UQK1 317 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 KCNIP3Q9Y2W7 256 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
HERPUD1-202ENST00000344114 LRRC30A6NM36 301 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 B9A039 149 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 GPR31O00270 319 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 CCSO14618 274 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 MGST3O14880 152 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 KCNAB3O43448 404 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 ZNF737O75373 536 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 ZNF205O95201 554 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 CD80P33681 288 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 GABRA2P47869 451 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 KRBOX4Q5JUW0 171 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 LAMTOR1Q6IAA8 161 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 BOLLQ8N9W6 283 aaKnown RBP11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 SECTM1Q8WVN6 248 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 RTN4IP1Q8WWV3 396 aaPredicted RBP11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 SLC5A7Q9GZV3 580 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 DNTTIP1Q9H147 329 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 SLA2Q9H6Q3 261 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 DYNLRB1Q9NP97 96 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 COMMD9Q9P000 198 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 OR2W1Q9Y3N9 320 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 HSPB11Q9Y547 144 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 MEGF8Q7Z7M0 2845 aa11.17□□□□□ -0.62
HERPUD1-202ENST00000344114 HMSDA8MTL9 139 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 RGS13O14921 159 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 C4BPBP20851 252 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 S100GP29377 79 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 COMPP49747 757 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 HOXA4Q00056 320 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 AESQ08117 197 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 PHLDA2Q53GA4 152 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 STUMQ69YW2 141 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 C1orf87Q8N0U7 546 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 ZNF561Q8N587 486 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 ANGPTL6Q8NI99 470 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 TMEM246Q9BRR3 403 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 GON7Q9BXV9 100 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 NMES1Q9C002 83 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 SAP30LQ9HAJ7 183 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 TAF9BQ9HBM6 251 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 PLSCR3Q9NRY6 295 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 METRNQ9UJH8 293 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 PAIP2BQ9ULR5 123 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 IGHV3OR15-7A0A075B7D8 119 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 C5orf51A6NDU8 294 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 FAM25EA8MYX2 175 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 HSPA12AO43301 675 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 VENTXO95231 258 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 IL2RGP31785 369 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 PPOXP50336 477 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 SRPXP78539 464 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 IFITM2Q01629 132 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 TMEM187Q14656 261 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 OR10V1Q8NGI7 309 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 OR5D13Q8NGL4 314 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 SGMS2Q8NHU3 365 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 IL1F10Q8WWZ1 152 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 GALMQ96C23 342 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 SDSLQ96GA7 329 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 TOLLIPQ9H0E2 274 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 FBXO9Q9UK97 447 aaPredicted RBP11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
HERPUD1-202ENST00000344114 IGKV1D-13A0A0B4J2D9 117 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 NKX6-3A6NJ46 265 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 C12orf77C9JDV5 145 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 K7N7A8 449 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 CYB5R3P00387 301 aaPredicted RBP11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 TFF1P04155 84 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 IGKV1-13P0DP09 117 aa11.15□□□□□ -0.63
HERPUD1-202ENST00000344114 GNRHRP30968 328 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms