RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TOMM40LQ969M1 308 aa11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 ZNF486Q96H40 463 aaPredicted RBP11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 Q96MF0 132 aa11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 FXYD6Q9H0Q3 95 aa11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 GHITMQ9H3K2 345 aa11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 UNKLQ9H9P5 680 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 C14orf166Q9Y224 244 aaKnown RBP11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 MYO9AB2RTY4 2548 aa11.93□□□□□ -0.5
NIPAL3-202ENST00000339255 IGHV3-43A0A0B4J1X8 118 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 FAM157AC9JC47 383 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 RLN1P04808 185 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 MSMBP08118 114 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 H2AFB2P0C5Z0 115 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 IGHV3-43DP0DP04 118 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 PGAM2P15259 253 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 SPNP16150 400 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 CD34P28906 385 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 TAS2R31P59538 309 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 METTL11BQ5VVY1 283 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 SLC5A7Q9GZV3 580 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
NIPAL3-202ENST00000339255 TRAV6A0A075B6T7 132 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 INMT-MINDY4F8WBC2 141 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 ARPC1BO15143 372 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 MMP23AO75900 390 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 CTSDP07339 412 aaPredicted RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 GATA3P23771 443 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 S100GP29377 79 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 MECP2P51608 486 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 UBE2MP61081 183 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 FAHD2BQ6P2I3 314 aaPredicted RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 GLCCI1Q86VQ1 547 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 SECTM1Q8WVN6 248 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 FAHD2AQ96GK7 314 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 ABHD14AQ9BUJ0 271 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 MMP28Q9H239 520 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 GPR132Q9UNW8 380 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 IGKV1D-13A0A0B4J2D9 117 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 RNF223E7ERA6 249 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 PRAF2O60831 178 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 DHFRP00374 187 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 IGKV1-13P0DP09 117 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 PRTN3P24158 256 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 ABCA11PQ4W5N1 156 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 OR8U1Q8NH10 309 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 AGMATQ9BSE5 352 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 RSRP1Q9BUV0 290 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 SUCNR1Q9BXA5 334 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 PARP12Q9H0J9 701 aaKnown RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
NIPAL3-202ENST00000339255 GPR31O00270 319 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 DVL1P1P54792 670 aaPredicted RBP11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 ARF6P62330 175 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 BAMBIQ13145 260 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 NCR3LG1Q68D85 454 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 C11orf88Q6PI97 169 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 ZNF645Q8N7E2 425 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 LINC01356Q8N9X3 169 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 CCDC71LQ8N9Z2 235 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 ZBTB34Q8NCN2 500 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 OR13D1Q8NGV5 346 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 AKR1E2Q96JD6 320 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 CLEC7AQ9BXN2 247 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 OR2D2Q9H210 308 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 C5orf66Q9H5L9 145 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 HEXA-AS1Q9H8Q6 139 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 PSG11Q9UQ72 335 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 INSIG2Q9Y5U4 225 aa11.9□□□□□ -0.5
NIPAL3-202ENST00000339255 ABCA1O95477 2261 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 TMEM128Q5BJH2 165 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 Q6ZNX1 250 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 ABHD12Q8N2K0 398 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 LINC00311Q8N616 119 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 Q8N7P7 452 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 BVESQ8NE79 360 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 SIRPDQ9H106 197 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 LPAR2Q9HBW0 351 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 SLC2A9Q9NRM0 540 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 ZNF221Q9UK13 617 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
NIPAL3-202ENST00000339255 IGHV2-26A0A0B4J1V2 119 aa11.88□□□□□ -0.51
NIPAL3-202ENST00000339255 J3QR06 171 aa11.88□□□□□ -0.51
NIPAL3-202ENST00000339255 RAB29O14966 203 aa11.88□□□□□ -0.51
NIPAL3-202ENST00000339255 ST8SIA5O15466 376 aa11.88□□□□□ -0.51
NIPAL3-202ENST00000339255 TOX4O94842 621 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms