RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
EPHB3-201ENST00000330394 MED13LQ71F56 2210 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 IGKV1D-8A0A087WSZ0 117 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 C9JQL5 133 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 BMPR1BO00238 502 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 NDUFA2O43678 99 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 FAM157CP0CG43 387 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 COL5A1-AS1Q5SY13 56 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF818PQ6ZRF7 136 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 RAB24Q969Q5 203 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 GINS3Q9BRX5 216 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 LINC01387J3KSC0 135 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 TOX3O15405 576 aaPredicted RBP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 USF1P22415 310 aaPredicted RBP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 TAS2R60P59551 318 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 RNF144BQ7Z419 303 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 TAF15Q92804 592 aaKnown RBP eCLIP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 WDR61Q9GZS3 305 aaKnown RBP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 OR1A1Q9P1Q5 309 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 RHOBP62745 196 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 PSG4Q00888 419 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 COL10A1Q03692 680 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 C3AR1Q16581 482 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 STUMQ69YW2 141 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 SELENOHQ8IZQ5 122 aaKnown RBP12.14□□□□□ -0.47
EPHB3-201ENST00000330394 ATOH7Q8N100 152 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 LOC285556D6RIA3 1793 aa12.14□□□□□ -0.47
EPHB3-201ENST00000330394 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 IGHV1OR15-9A0A0B4J2B8 117 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 KLRC4-KLRK1H3BQV0 150 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ZIC3O60481 467 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CD5P06127 495 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CT45A6P0DMU7 189 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CT45A5P0DMU8 189 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CT45A7P0DMV0 189 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF124Q15973 351 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CT45A1Q5HYN5 189 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CT45A3Q8NHU0 189 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 RCC1LQ96I51 464 aaKnown RBP12.13□□□□□ -0.47
EPHB3-201ENST00000330394 DUSP15Q9H1R2 295 aaPredicted RBP12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 M0R2Z0 102 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 TMEM183AQ8IXX5 376 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 LYG1Q8N1E2 194 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 TMEM38BQ9NVV0 291 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
EPHB3-201ENST00000330394 CXCL1P09341 107 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 GNG10P50151 68 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 HIF1ANQ9NWT6 349 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF319Q9P2F9 582 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 SIP14410 1827 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 SUCLG1P53597 346 aaKnown RBP12.13□□□□□ -0.47
EPHB3-201ENST00000330394 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
EPHB3-201ENST00000330394 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
EPHB3-201ENST00000330394 SCN5AQ14524 2016 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 CADP27708 2225 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 AGAP20933 346 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 TCTAP57738 103 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF658BQ4V348 819 aaPredicted RBP12.12□□□□□ -0.47
EPHB3-201ENST00000330394 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 MOB1BQ7L9L4 216 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 SHISA7A6NL88 538 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 ST8SIA5O15466 376 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 HERPUD1Q15011 391 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 TUSC5Q8IXB3 177 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 ST6GALNAC3Q8NDV1 305 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 SYNGR1O43759 233 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 WFDC1Q9HC57 220 aa12.12□□□□□ -0.47
EPHB3-201ENST00000330394 IGHEP01854 428 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 CTAG1AP78358 180 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 SPINK14Q6IE38 97 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 HEPN1Q6WQI6 88 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 LYZL6O75951 148 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
EPHB3-201ENST00000330394 GNB1P62873 340 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 ERHP84090 104 aaKnown RBP12.11□□□□□ -0.47
EPHB3-201ENST00000330394 SMIM21Q3B7S5 101 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
EPHB3-201ENST00000330394 CISD2Q8N5K1 135 aaKnown RBP12.11□□□□□ -0.47
EPHB3-201ENST00000330394 OCIAD1Q9NX40 245 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 IGKV3-11P04433 115 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 DEFA4P12838 97 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 CCL11P51671 97 aa12.11□□□□□ -0.47
EPHB3-201ENST00000330394 ELOBQ15370 118 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms