RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RAB22AQ9UL26 194 aa21.97■■□□□ 1.11
ATPAF1-201ENST00000329231 TRBV6-6A0A0A6YYG2 114 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 TRIM64CA6NLI5 447 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 FOXI3A8MTJ6 420 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 LDLRAD4O15165 306 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 GADD45AP24522 165 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 PPP1CCP36873 323 aaKnown RBP21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 LY6G6FQ5SQ64 297 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 C5orf24Q7Z6I8 188 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 TPRA1Q86W33 373 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 LYG1Q8N1E2 194 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 C5orf56Q8N8D9 126 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 SETD6Q8TBK2 473 aa21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 EAF1Q96JC9 268 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 CITED2Q99967 270 aaPredicted RBP21.96■■□□□ 1.11
ATPAF1-201ENST00000329231 TMEM272A0A1B0GTI8 110 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 TMEM50BP56557 158 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 NSUN5P1Q3KNT7 163 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 IL1F10Q8WWZ1 152 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 KCTD7Q96MP8 289 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 MGAT4AQ9UM21 535 aa21.95■■□□□ 1.1
ATPAF1-201ENST00000329231 LANCL1O43813 399 aa21.94■■□□□ 1.1
ATPAF1-201ENST00000329231 NR2C2APQ86WQ0 139 aa21.94■■□□□ 1.1
ATPAF1-201ENST00000329231 ARHGAP5-AS1Q96IT6 56 aa21.94■■□□□ 1.1
ATPAF1-201ENST00000329231 PECRQ9BY49 303 aa21.94■■□□□ 1.1
ATPAF1-201ENST00000329231 LOC100506127A0A0U1RQW1 187 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 MOSP00540 346 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 Q6ZPA2 131 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 Q8N6K4 173 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 OR2AK2Q8NG84 335 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 C12orf4Q9NQ89 552 aa21.93■■□□□ 1.1
ATPAF1-201ENST00000329231 VWFP04275 2813 aa21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 NCBP2LA6PVI3 153 aaKnown RBP21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 NOTOA8MTQ0 251 aa21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 CD83Q01151 205 aa21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 TIMM50Q3ZCQ8 353 aa21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 CMSS1Q9BQ75 279 aaKnown RBP21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 HDHD3Q9BSH5 251 aaPredicted RBP21.92■■□□□ 1.1
ATPAF1-201ENST00000329231 OPN1MWP04001 364 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 OPN1MW2P0DN77 364 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 OPN1MW3P0DN78 364 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 OR4X2Q8NGF9 303 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 YIPF6Q96EC8 236 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 CENPOQ9BU64 300 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 RNF167Q9H6Y7 350 aa21.91■■□□□ 1.1
ATPAF1-201ENST00000329231 SMIM30A4D0T7 59 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 ZNF736B4DX44 427 aaPredicted RBP21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 RAB6AP20340 208 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 SDC2P34741 201 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 HLA-DRB3P79483 266 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 PLA2G7Q13093 441 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 PLAC9Q5JTB6 97 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 OR4F17Q8NGA8 305 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 OR8H1Q8NGG4 311 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 RAB3CQ96E17 227 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 OR4F4Q96R69 305 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 Q9N2K0 584 aa21.9■■□□□ 1.1
ATPAF1-201ENST00000329231 ADARB2-AS1A8MUL3 147 aa21.89■■□□□ 1.09
ATPAF1-201ENST00000329231 MRPS15P82914 257 aaKnown RBP21.89■■□□□ 1.09
ATPAF1-201ENST00000329231 LSAMPQ13449 338 aa21.89■■□□□ 1.09
ATPAF1-201ENST00000329231 ODF3L1Q8IXM7 274 aa21.89■■□□□ 1.09
ATPAF1-201ENST00000329231 R3HDM4Q96D70 268 aa21.89■■□□□ 1.09
ATPAF1-201ENST00000329231 TCRBV4S1A1TA0A5B7 111 aa21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 IGHG2P01859 326 aa21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 SLC2A2P11168 524 aaPredicted RBP21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 SLC35E3Q7Z769 313 aa21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 PTX4Q96A99 478 aa21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 LIN7CQ9NUP9 197 aaKnown RBP21.88■■□□□ 1.09
ATPAF1-201ENST00000329231 A0A0B4J203 849 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 PSMB11A5LHX3 300 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 METTL21EPA6NDL7 271 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 SERPINE3A8MV23 424 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 AIREO43918 545 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 CD3GP09693 182 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 SMIM18P0DKX4 95 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 ZBTB25P24278 435 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 DEFA6Q01524 100 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 TCTEX1D4Q5JR98 221 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 ZNF833PQ6ZTB9 187 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 Q8N9W7 124 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 OR10R2Q8NGX6 335 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 CHPT1Q8WUD6 406 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 S1PR3Q99500 378 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 IFI27L2Q9H2X8 130 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 PLSCR3Q9NRY6 295 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 PIPOXQ9P0Z9 390 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 SLC23A1Q9UHI7 598 aa21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 TSSC4Q9Y5U2 329 aaPredicted RBP21.87■■□□□ 1.09
ATPAF1-201ENST00000329231 SAA2-SAA4A0A096LPE2 208 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 ITGB1BP1O14713 200 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 ST8SIA5O15466 376 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 HSPA12AO43301 675 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 SAA2P0DJI9 122 aaPredicted RBP21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 OR3A3P47888 321 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 MXD1Q05195 221 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 MOGAT2Q3SYC2 334 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 FAM71F2Q6NXP2 309 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 SFXN4Q6P4A7 337 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 FOXRED2Q8IWF2 684 aa21.86■■□□□ 1.09
ATPAF1-201ENST00000329231 RASL11BQ9BPW5 248 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms