RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 BEX1Q9HBH7 125 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 OPN4Q9UHM6 478 aa12.6□□□□□ -0.39
PDLIM5-202ENST00000318007 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 HSD17B6O14756 317 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 HERV-K104P61576 105 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 ABHD12Q8N2K0 398 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 OR2AK2Q8NG84 335 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 OR2D2Q9H210 308 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 NCOR1P1Q9H4R4 102 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 METTL8Q9H825 291 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 JPT1Q9UK76 154 aa12.59□□□□□ -0.39
PDLIM5-202ENST00000318007 hCG_1809904A0A1W2PP81 198 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 A0A1W2PPE2 198 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 A0A1W2PR64 198 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 A0A1W2PRV1 198 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 HTD2P86397 168 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 ZNF660Q6AZW8 331 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 TMED4Q7Z7H5 227 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 H1FOOQ8IZA3 346 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 OR13C8Q8NGS7 320 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 TMEM133Q9H2Q1 129 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 TRAV40A0A0B4J280 105 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 DIRAS3O95661 229 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 AVPP01185 164 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 CTXN2P0C2S0 81 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 PGAM2P15259 253 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 TBPP20226 339 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 LINC00205P59089 165 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 LYG1Q8N1E2 194 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 ARRDC1Q8N5I2 433 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 TBX15Q96SF7 602 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 ABHD14AQ9BUJ0 271 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 SIRPDQ9H106 197 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 NUDT15Q9NV35 164 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 ZNF107Q9UII5 783 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 OR2W1Q9Y3N9 320 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
PDLIM5-202ENST00000318007 RLN1P04808 185 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 MMP9P14780 707 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 HOXB4P17483 251 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 REG1BP48304 166 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 C11orf91Q3C1V1 193 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 PHLDA2Q53GA4 152 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 MZT2BQ6NZ67 158 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 ZNF554Q86TJ5 538 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 PRRT1Q99946 306 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 PALMDQ9NP74 551 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 AUP1Q9Y679 476 aa12.57□□□□□ -0.4
PDLIM5-202ENST00000318007 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 M0R1W7 72 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 ARG1P05089 322 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 DIAPH2-AS1Q14236 149 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 RPL39P5Q59GN2 51 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 RUSC1-AS1Q66K80 236 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 DHRS11Q6UWP2 260 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 BRD3OSQ6XYD6 125 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 OR10X1Q8NGY0 326 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 TERB2Q8NHR7 220 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 OCEL1Q9H607 264 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 TOR1AO14656 332 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 YPEL1O60688 119 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 SLC6A1P30531 599 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 LUMP51884 338 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 CYB5R2Q6BCY4 276 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 ZNF818PQ6ZRF7 136 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 Q71RC1 249 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 GIMAP1Q8WWP7 306 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 C22orf15Q8WYQ4 148 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 YPEL2Q96QA6 119 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 DPAGT1Q9H3H5 408 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
PDLIM5-202ENST00000318007 TRAV20A0A0B4J274 112 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 ARPC1BO15143 372 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 TUSC2O75896 110 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 GZMKP49863 264 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 PAX8Q06710 450 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 Q3ZCU0 254 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 PLA1AQ53H76 456 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 C1orf229Q6ZS94 237 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 TNFRSF14Q92956 283 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 UPRTQ96BW1 309 aa12.55□□□□□ -0.4
PDLIM5-202ENST00000318007 MOB3AQ96BX8 217 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms