RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SPCS1Q9Y6A9 102 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 SFTPA2Q8IWL1 248 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 SFTPA1Q8IWL2 248 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 OR1N1Q8NGS0 311 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 MTCH2Q9Y6C9 303 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IGKV3D-15A0A087WSY6 115 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 FFAR1O14842 300 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IGKV3-15P01624 115 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 PNLIPP16233 465 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 YPEL5P62699 121 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 HSPB1P04792 205 aaKnown RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 TFPI2P48307 235 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 GFERP55789 205 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 CCL17Q92583 94 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IGKV3D-11A0A0A0MRZ8 115 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 TRAV8-6A0A0B4J262 113 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 CTXND1A0A1B0GTU2 59 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IGKV3-11P04433 115 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 ZNF793Q6ZN11 406 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 OR1L1Q8NH94 360 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 FAM206AQ9NX38 181 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 KLK8O60259 260 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 PRSS23O95084 383 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 FCGR2BP31994 310 aaPredicted RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 PPICP45877 212 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 MOSPD3O75425 235 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 IGFBP6P24592 240 aaPredicted RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 YBX1P67809 324 aaKnown RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 IGLV3-10A0A075B6K4 115 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 FRG2CA6NGY1 282 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 KIR2DS2P43631 304 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 MYEOVQ96EZ4 313 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 COL25A1Q9BXS0 654 aaPredicted RBP7.67□□□□□ -1.18
USF3-201ENST00000316407 LOC285556D6RIA3 1793 aa7.67□□□□□ -1.18
USF3-201ENST00000316407 HOXA4Q00056 320 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 RPS19BP1Q86WX3 136 aaKnown RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 NDUFS6O75380 124 aaKnown RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 FUT5Q11128 374 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 RTL10Q7L3V2 364 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 GNG3P63215 75 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 ZNF324BQ6AW86 544 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 SPSB2Q99619 263 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 TMPRSS2O15393 492 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 CTSDP07339 412 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 HOXC13P31276 330 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 SLC23A3Q6PIS1 610 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 SFRP2Q96HF1 295 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 GMLQ99445 158 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 THYN1Q9P016 225 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 M0QZ24 198 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 OR2A4O95047 310 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 SLC25A1P53007 311 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 OR2A7Q96R45 310 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 OCIAD1Q9NX40 245 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 A0A1W2PPE3 182 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 KIR2DL1P43626 348 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 KIR2DL2P43627 348 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 KCNE4Q8WWG9 221 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 OR4S2Q8NH73 311 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 PAXXQ9BUH6 204 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 QTRT1Q9BXR0 403 aaKnown RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 CNOT1A5YKK6 2376 aaKnown RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 HLA-DQA1P01909 254 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 IGFBP7Q16270 282 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 Q8IYB0 196 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 KISS1RQ969F8 398 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 PERPQ96FX8 193 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 PLA2G3Q9NZ20 509 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 LYZL6O75951 148 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 HLA-DRB1P01911 266 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 HERPUD1Q15011 391 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 ZNF770Q6IQ21 691 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 CAMKMTQ7Z624 323 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 IGHV3OR15-7A0A075B7D8 119 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 CTDSPLO15194 276 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 RBFOX2O43251 390 aaKnown RBP eCLIP7.66□□□□□ -1.18
USF3-201ENST00000316407 ACVR1Q04771 509 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 TNFRSF9Q07011 255 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 OR8B2Q96RD0 313 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 TMEM160Q9NX00 188 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 MBD1Q9UIS9 605 aaPredicted RBP7.66□□□□□ -1.18
USF3-201ENST00000316407 PROCRQ9UNN8 238 aa7.66□□□□□ -1.18
USF3-201ENST00000316407 ZGLP1P0C6A0 271 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 MBNL2Q5VZF2 373 aaKnown RBP7.65□□□□□ -1.18
USF3-201ENST00000316407 KCNS1Q96KK3 526 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 DLX6P56179 175 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 PRSS41Q7RTY9 318 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 OR4D5Q8NGN0 318 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 SSBP3Q9BWW4 388 aaPredicted RBP7.65□□□□□ -1.18
USF3-201ENST00000316407 TRPM7Q96QT4 1865 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 GREB1LQ9C091 1923 aaPredicted RBP7.65□□□□□ -1.18
USF3-201ENST00000316407 DPRXA6NFQ7 191 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 IGHV4-39P01824 125 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 PPP1CCP36873 323 aaKnown RBP7.65□□□□□ -1.18
USF3-201ENST00000316407 WFDC3Q8IUB2 231 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 CCL27Q9Y4X3 112 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 PXMP4Q9Y6I8 212 aa7.65□□□□□ -1.18
USF3-201ENST00000316407 PRF1P14222 555 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms