RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PCSK4Q6UW60 755 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 OVCH2Q7RTZ1 564 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 SLIRPQ9GZT3 109 aaKnown RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 C7orf69Q9H7B7 122 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 IL19Q9UHD0 177 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 LMX1BO60663 402 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 ERVS71-1P61550 626 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 IGSF11Q5DX21 431 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 SNRNP40Q96DI7 357 aaKnown RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 AMELYQ99218 206 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 ODAMA1E959 279 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 MC5RP33032 325 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 GZMMP51124 257 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 MIDNQ504T8 468 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 DGAT2L7PQ6IED9 249 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 MRPL14Q6P1L8 145 aaKnown RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 OR1L1Q8NH94 360 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 CXorf58Q96LI9 332 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 CGB1A6NKQ9 187 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 SCTP09683 121 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 ZNF561Q8N587 486 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 OR4C12Q96R67 309 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 THSD7BQ9C0I4 1608 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 A0A1W2PP11 408 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 A0A1W2PPQ1 181 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 BCL2L11O43521 198 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 SNRPCP09234 159 aaKnown RBP11.61□□□□□ -0.55
RFFL-201ENST00000315249 RPL30P62888 115 aaKnown RBP11.61□□□□□ -0.55
RFFL-201ENST00000315249 GCSAMQ8N6F7 178 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 MYPOPQ86VE0 399 aaPredicted RBP11.61□□□□□ -0.55
RFFL-201ENST00000315249 WDYHV1Q96HA8 205 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 ABCA1O95477 2261 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 ZNRF1Q8ND25 227 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 OR4P4Q8NGL7 312 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 NEU4Q8WWR8 484 aaPredicted RBP11.61□□□□□ -0.55
RFFL-201ENST00000315249 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 Q9N2K0 584 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 WNT5AP41221 380 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 ZNF137PP52743 207 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 EFNB2P52799 333 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 IL13RA2Q14627 380 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 RRN3P1Q2M238 152 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 OR4A5Q8NH83 315 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 TLNRD1Q9H1K6 362 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 CALYQ9NYX4 217 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 A0A1W2PRX2 142 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 ANKRD20A5PA0PJZ0 165 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 SLC25A17O43808 307 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 IGHV1-2P23083 117 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 PSG5Q15238 335 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 C16orf92Q96LL3 132 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 NPAS1Q99742 590 aa11.61□□□□□ -0.55
RFFL-201ENST00000315249 GAR1Q9NY12 217 aaKnown RBP11.61□□□□□ -0.55
RFFL-201ENST00000315249 LIMS1P48059 325 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 TMEM106BQ9NUM4 274 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ZNF737O75373 536 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
RFFL-201ENST00000315249 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ADAD2Q8NCV1 583 aaKnown RBP11.6□□□□□ -0.55
RFFL-201ENST00000315249 COL4A6Q14031 1691 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 GPR179Q6PRD1 2367 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 PRSS23O95084 383 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 TRAPPC2P0DI81 140 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 TRAPPC2BP0DI82 140 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
RFFL-201ENST00000315249 SEZ6L2Q6UXD5 910 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 METTL26Q96S19 204 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 CLEC7AQ9BXN2 247 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ZNF629Q9UEG4 869 aaPredicted RBP11.6□□□□□ -0.55
RFFL-201ENST00000315249 TSTD3H0UI37 97 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 TGFBR3LH3BV60 316 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ZNF154Q13106 437 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ATP6V1FQ16864 119 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 IGLV3-21P80748 117 aaPredicted RBP11.6□□□□□ -0.55
RFFL-201ENST00000315249 ROM1Q03395 351 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 FAM201AQ5SY85 155 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 ZBTB34Q8NCN2 500 aa11.6□□□□□ -0.55
RFFL-201ENST00000315249 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 14.5
RFFL-201ENST00000315249 RLFQ13129 1914 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 MAP1LC3B2A6NCE7 125 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 CXorf66Q5JRM2 361 aaPredicted RBP11.59□□□□□ -0.55
RFFL-201ENST00000315249 CLEC18BQ6UXF7 455 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 LYZL2Q7Z4W2 148 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 MAP1LC3BQ9GZQ8 125 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 ST6GALNAC2Q9UJ37 374 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 AKIP1Q9NQ31 210 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 PKDREJQ9NTG1 2253 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 IGLV1-36A0A0B4J1U3 117 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
RFFL-201ENST00000315249 FCGR3AP08637 254 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 WNT9BO14905 357 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 REG1AP05451 166 aa11.59□□□□□ -0.55
RFFL-201ENST00000315249 RAB5AP20339 215 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms