RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 PBDC1Q9BVG4 233 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 REPIN1Q9BWE0 567 aaKnown RBP8.62□□□□□ -1.03
FOXN4-201ENST00000299162 NCOR1P1Q9H4R4 102 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 IGF2RP11717 2491 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 ZNF724A8MTY0 619 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 MKRN2OSH3BPM6 223 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 TCF21O43680 179 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 ALDH3B1P43353 468 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 ERVFRD-1P60508 538 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 DLK1P80370 383 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 LTC4SQ16873 150 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 FBXW12Q6X9E4 464 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 ZNF826PQ6ZT77 177 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 CLUHP3Q96NS8 147 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 PARP11Q9NR21 331 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 TLN1Q9Y490 2541 aaKnown RBP8.62□□□□□ -1.03
FOXN4-201ENST00000299162 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
FOXN4-201ENST00000299162 CST7O76096 145 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 PPYP01298 95 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 PGA5P0DJD9 388 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 EIF3IQ13347 325 aaKnown RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 ARL6IP1Q15041 203 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 C1orf185Q5T7R7 199 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 VWA1Q6PCB0 445 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 C20orf204Q6ZNR8 217 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 C22orf15Q8WYQ4 148 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 NTNG2Q96CW9 530 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 WDYHV1Q96HA8 205 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 POM121L2Q96KW2 1035 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TUBA4BQ9H853 241 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 OBP2BQ9NPH6 170 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 SH3BGRL2Q9UJC5 107 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 AKAP6Q13023 2319 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 ATRXP46100 2492 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 IGKV1D-13A0A0B4J2D9 117 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 OR5H1A6NKK0 313 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 J3QW42 95 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TRGC1P0CF51 173 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 IGKV1-13P0DP09 117 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 CEACAM8P31997 349 aaPredicted RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 ARSJQ5FYB0 599 aaPredicted RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 Q5PR19 223 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 FBXW9Q5XUX1 488 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 FAM53AQ6NSI3 398 aaPredicted RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 GAPTQ8N292 157 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TPRX1Q8N7U7 411 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 CYB561D1Q8N8Q1 229 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 POC1AQ8NBT0 407 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 C10orf35Q96D05 121 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 AQP10Q96PS8 301 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 NUDT16L1Q9BRJ7 211 aaKnown RBP8.61□□□□□ -1.03
FOXN4-201ENST00000299162 CDH20Q9HBT6 801 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 CCL28Q9NRJ3 127 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 KCNS2Q9ULS6 477 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 ZFP92A6NM28 416 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 IGHV3-13P01766 116 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 IGHV3-7P01780 117 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TK1P04183 234 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 RAB11AP62491 216 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TMEM42Q69YG0 159 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 SLC35G3Q8N808 338 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 TMEM178AQ8NBL3 297 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 MDS2Q8NDY4 140 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 OR2G3Q8NGZ4 309 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 DIRC2Q96SL1 478 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 PRDM14Q9GZV8 571 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 NAA60Q9H7X0 242 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 MSL2Q9HCI7 577 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 USF3Q68DE3 2245 aa8.61□□□□□ -1.03
FOXN4-201ENST00000299162 COL12A1Q99715 3063 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
FOXN4-201ENST00000299162 IGKV3D-15A0A087WSY6 115 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 CRYM-AS1A6NIL9 109 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 CTSDP07339 412 aaPredicted RBP8.6□□□□□ -1.03
FOXN4-201ENST00000299162 TDGF1P3P51864 188 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 WDR25Q64LD2 544 aaPredicted RBP8.6□□□□□ -1.03
FOXN4-201ENST00000299162 ZNF429Q86V71 674 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 ZNF695Q8IW36 515 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 FRZBQ92765 325 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 RNF150Q9ULK6 438 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 IFNL4K9M1U5 179 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 LINC00614P0C842 121 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 MPZP25189 248 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 ARR3P36575 388 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 TNFSF10P50591 281 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 RUNX1Q01196 453 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 FOXF2Q12947 444 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 RNPS1Q15287 305 aaKnown RBP8.6□□□□□ -1.03
FOXN4-201ENST00000299162 HMGN3Q15651 99 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 CEACAM21Q3KPI0 293 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 HEPN1Q6WQI6 88 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 RAB24Q969Q5 203 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 TMEM45BQ96B21 275 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
FOXN4-201ENST00000299162 PPP1R3CQ9UQK1 317 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms