RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 BADQ92934 168 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 GPR146Q96CH1 333 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 LOXL4Q96JB6 756 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 NAT8BQ9UHF3 227 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 CLDN16Q9Y5I7 305 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 NAPSAO96009 420 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 HOXB2P14652 356 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 DTX1Q86Y01 620 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 ODF3L1Q8IXM7 274 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 PYGO2Q9BRQ0 406 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 FBXL7Q9UJT9 491 aa8.74□□□□□ -1.01
CLDN1-201ENST00000295522 WDR1O75083 606 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 CBR3O75828 277 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 IGKV1D-33P01593 117 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 ID3Q02535 119 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 OR2M3Q8NG83 312 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 OR56B2PQ8NGI1 322 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 FGF14Q92915 247 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 BORCS7Q96B45 105 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 PINX1Q96BK5 328 aaKnown RBP8.73□□□□□ -1.01
CLDN1-201ENST00000295522 SIGLEC12Q96PQ1 595 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 TM2D1Q9BX74 207 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 LOC102725191A0A1B0GVB3 256 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 ZNF814B7Z6K7 855 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 RAB29O14966 203 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 ATP5G3P48201 142 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 PAX9P55771 341 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 GFERP55789 205 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 PAFAH1B2P68402 229 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 OR4A47Q6IF82 309 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 LCN12Q6JVE5 192 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 RALGAPA1Q6GYQ0 2036 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 SOX8P57073 446 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 TAF15Q92804 592 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLDN1-201ENST00000295522 METTL7AQ9H8H3 244 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 TAAR3PQ9P1P4 343 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 PXMP4Q9Y6I8 212 aa8.73□□□□□ -1.01
CLDN1-201ENST00000295522 HEATR1Q9H583 2144 aaKnown RBP8.72□□□□□ -1.01
CLDN1-201ENST00000295522 H0Y8G0 127 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 HS3ST1O14792 307 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 PDCD6O75340 191 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 ZNF253O75346 499 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 TUSC2O75896 110 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 TNFP01375 233 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 CLPSP04118 112 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 Q56UQ5 140 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 FAM69BQ5VUD6 431 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 ZNF525Q8N782 197 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 GJC3Q8NFK1 279 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 BCL2L2Q92843 193 aaPredicted RBP8.72□□□□□ -1.01
CLDN1-201ENST00000295522 BMFQ96LC9 184 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 RAB40CQ96S21 281 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 THSD7BQ9C0I4 1608 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 A0A1W2PPV4 95 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 HYPMO75409 117 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 NRASP01111 189 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 CD38P28907 300 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 CNN3Q15417 329 aaKnown RBP8.72□□□□□ -1.01
CLDN1-201ENST00000295522 OR13H1Q8NG92 308 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 MBD3L1Q8WWY6 194 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 RDH5Q92781 318 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 SPTSSAQ969W0 71 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 ZNF501Q96CX3 271 aaPredicted RBP8.72□□□□□ -1.01
CLDN1-201ENST00000295522 PLA2G2FQ9BZM2 168 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 SLC35D1Q9NTN3 355 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 SERTAD4Q9NUC0 356 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 OBSL1O75147 1896 aa8.72□□□□□ -1.01
CLDN1-201ENST00000295522 LIPT2A6NK58 231 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 C3orf80F5H4A9 247 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 KRASP01116 189 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 HNRNPA1P09651 372 aaKnown RBP eCLIP8.71□□□□□ -1.01
CLDN1-201ENST00000295522 GLB1P16278 677 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 NPBWR2P48146 333 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 EDDM3BP56851 147 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 PRR31Q5SQ13 230 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 ACSM6Q6P461 480 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 ZNF114Q8NC26 417 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 ADIPOR1Q96A54 375 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 NUDT11Q96G61 164 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 RNF2Q99496 336 aa8.71□□□□□ -1.01
CLDN1-201ENST00000295522 TRAV38-1A0A0B4J264 116 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 TMEM250H0YL14 139 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 IGHMP01871 453 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 CA3P07451 260 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 MGST1P10620 155 aaKnown RBP8.71□□□□□ -1.02
CLDN1-201ENST00000295522 PSG1P11464 419 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 TNFSF4P23510 183 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 OTX1P32242 354 aaPredicted RBP8.71□□□□□ -1.02
CLDN1-201ENST00000295522 LCN2P80188 198 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 SERF2P84101 59 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 RELBQ01201 579 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 HLA-DRB5Q30154 266 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 KLHDC1Q8N7A1 406 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 ZNF439Q8NDP4 499 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 Q8NFD4 153 aa8.71□□□□□ -1.02
CLDN1-201ENST00000295522 WDR61Q9GZS3 305 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms