RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CT55Q8WUE5 264 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 PKIBQ9C010 78 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 ZNF703Q9H7S9 590 aaPredicted RBP16.25■□□□□ 0.19
LSM12-201ENST00000293406 TMEM9BQ9NQ34 198 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 WDR1O75083 606 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 PGA5P0DJD9 388 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 CA6P23280 308 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 MOB1BQ7L9L4 216 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 FAM173AQ9BQD7 235 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 OR51I2Q9H344 312 aa16.25■□□□□ 0.19
LSM12-201ENST00000293406 ZNF737O75373 536 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 APLNRP35414 380 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 WNT5AP41221 380 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 WDR25Q64LD2 544 aaPredicted RBP16.24■□□□□ 0.19
LSM12-201ENST00000293406 Q6P435 159 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 UBALD1Q8TB05 177 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 TAF15Q92804 592 aaKnown RBP eCLIP16.24■□□□□ 0.19
LSM12-201ENST00000293406 S100PBPQ96BU1 408 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 THOC3Q96J01 351 aaKnown RBP16.24■□□□□ 0.19
LSM12-201ENST00000293406 SNX22Q96L94 193 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 PARD6GQ9BYG4 376 aaPredicted RBP16.24■□□□□ 0.19
LSM12-201ENST00000293406 B4GALT7Q9UBV7 327 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 TRAPPC2LQ9UL33 140 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 UBE2L5PA0A1B0GUS4 154 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 B4E171 279 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 PHOX2AO14813 284 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 GPX4P36969 197 aaPredicted RBP16.24■□□□□ 0.19
LSM12-201ENST00000293406 TSPAN7P41732 249 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 CLN3Q13286 438 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 BEND4Q6ZU67 534 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 MAFAQ8NHW3 353 aaPredicted RBP16.24■□□□□ 0.19
LSM12-201ENST00000293406 LHX4Q969G2 390 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 SLC39A9Q9NUM3 307 aa16.24■□□□□ 0.19
LSM12-201ENST00000293406 J3QT63 122 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 SIRPB1O00241 398 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 NDUFS6O75380 124 aaKnown RBP16.23■□□□□ 0.19
LSM12-201ENST00000293406 LY86O95711 162 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 SLC38A11Q08AI6 406 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 IGFBP7Q16270 282 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 C6orf15Q6UXA7 325 aaPredicted RBP16.23■□□□□ 0.19
LSM12-201ENST00000293406 SMIM7Q9BQ49 75 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 NAT8Q9UHE5 227 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 CD81P60033 236 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 GAMTQ14353 236 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 ADIRFQ15847 76 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 DNLZQ5SXM8 178 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 ZNF600Q6ZNG1 722 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 ZNF497Q6ZNH5 498 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 TIPARPQ7Z3E1 657 aaKnown RBP16.23■□□□□ 0.19
LSM12-201ENST00000293406 PACRGQ96M98 296 aaPredicted RBP16.23■□□□□ 0.19
LSM12-201ENST00000293406 STRADBQ9C0K7 418 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 PITPNC1Q9UKF7 332 aa16.23■□□□□ 0.19
LSM12-201ENST00000293406 NEURL1O76050 574 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 NCR3LG1Q68D85 454 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 OR8G2PQ6IF36 304 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 OR10A7Q8NGE5 316 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 HLA-CQ95604 372 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 HES7Q9BYE0 225 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 CDH20Q9HBT6 801 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 A0A1W2PR80 420 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 FAM166BA8MTA8 275 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 MDKP21741 143 aaPredicted RBP16.22■□□□□ 0.19
LSM12-201ENST00000293406 MEF2BQ02080 365 aaPredicted RBP16.22■□□□□ 0.19
LSM12-201ENST00000293406 PMS2P11Q13670 270 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 FGFRL1Q8N441 504 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 RPP25LQ8N5L8 163 aaKnown RBP16.22■□□□□ 0.19
LSM12-201ENST00000293406 DRAM1Q8N682 238 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 AGMATQ9BSE5 352 aa16.22■□□□□ 0.19
LSM12-201ENST00000293406 FAM90A26D6RGX4 464 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 CLDN1O95832 211 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 OR2H2O95918 312 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 CEACAM6P40199 344 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 MAGEA5P43359 124 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 TMEM241Q24JQ0 296 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 SPATA46Q5T0L3 261 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 CYP2G1PQ6ZSU1 146 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 HIST1H2BLQ99880 126 aa16.21■□□□□ 0.19
LSM12-201ENST00000293406 PCSK5Q92824 1860 aa16.21■□□□□ 0.18
LSM12-201ENST00000293406 CER1O95813 267 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 HNF4GQ14541 408 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 OR4X1Q8NH49 305 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 RHOVQ96L33 236 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 PRSS50Q9UI38 385 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 TIMM9Q9Y5J7 89 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 SMCO3A2RU48 225 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 RNF212BA8MTL3 300 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 IGKV1D-33P01593 117 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 IGKV1-33P01594 117 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 CD55P08174 381 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 HOXA6P31267 233 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 TMEM14EPQ6UXP3 125 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 C16orf82Q7Z2V1 217 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 NUFIP2Q7Z417 695 aaKnown RBP16.2■□□□□ 0.18
LSM12-201ENST00000293406 SRD5A3Q9H8P0 318 aa16.2■□□□□ 0.18
LSM12-201ENST00000293406 TNFRSF9Q07011 255 aa16.19■□□□□ 0.18
LSM12-201ENST00000293406 ABHD17BQ5VST6 288 aa16.19■□□□□ 0.18
LSM12-201ENST00000293406 RTL8AQ9BWD3 113 aa16.19■□□□□ 0.18
LSM12-201ENST00000293406 LOXL2Q9Y4K0 774 aa16.19■□□□□ 0.18
LSM12-201ENST00000293406 R4GN57 208 aa16.19■□□□□ 0.18
LSM12-201ENST00000293406 CHD3Q12873 2000 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms