RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 GAPTQ8N292 157 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 SETD6Q8TBK2 473 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 ABHD5Q8WTS1 349 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 IL1F10Q8WWZ1 152 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 UBE2E2Q96LR5 201 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 MRPL20Q9BYC9 149 aaKnown RBP10.98□□□□□ -0.65
TPM1-202ENST00000288398 OR51J1Q9H342 316 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 ZNF256Q9Y2P7 627 aaPredicted RBP10.98□□□□□ -0.65
TPM1-202ENST00000288398 COL7A1Q02388 2944 aa10.98□□□□□ -0.65
TPM1-202ENST00000288398 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 ATP6V0E1O15342 81 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 YPEL1O60688 119 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 HLA-DRB1P01911 266 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 VHLP40337 213 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 ZNF616Q08AN1 781 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 GLT8D1Q68CQ7 371 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 LIN54Q6MZP7 749 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 MRPL30Q8TCC3 161 aaKnown RBP10.97□□□□□ -0.65
TPM1-202ENST00000288398 YPEL2Q96QA6 119 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 OR5B12Q96R08 314 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 VCXQ9H320 206 aa10.97□□□□□ -0.65
TPM1-202ENST00000288398 MBNL3Q9NUK0 354 aaKnown RBP10.97□□□□□ -0.65
TPM1-202ENST00000288398 TENM3Q9P273 2699 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 CD1AP06126 327 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 CD40LGP29965 261 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 C5orf64Q2M2E5 130 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 RBM48Q5RL73 367 aaKnown RBP10.96□□□□□ -0.65
TPM1-202ENST00000288398 BPIFB6Q8NFQ5 453 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 NABP2Q9BQ15 211 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 TMEM59Q9BXS4 323 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 ANKRD60Q9BZ19 345 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 GHITMQ9H3K2 345 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 PIPOXQ9P0Z9 390 aa10.96□□□□□ -0.65
TPM1-202ENST00000288398 SAA2-SAA4A0A096LPE2 208 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 G3V318 75 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 H7C2Y5 167 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 GSTP1P09211 210 aaKnown RBP10.95□□□□□ -0.66
TPM1-202ENST00000288398 SAA2P0DJI9 122 aaPredicted RBP10.95□□□□□ -0.66
TPM1-202ENST00000288398 BLVRBP30043 206 aaPredicted RBP10.95□□□□□ -0.66
TPM1-202ENST00000288398 TMEM267Q0VDI3 215 aaPredicted RBP10.95□□□□□ -0.66
TPM1-202ENST00000288398 FHL3Q13643 280 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 ZNF833PQ6ZTB9 187 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 MOB1BQ7L9L4 216 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 ZNF491Q8N8L2 437 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 ZNF485Q8NCK3 441 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 KCNG3Q8TAE7 436 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 MND1Q9BWT6 205 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 PSORS1C1Q9UIG5 152 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
TPM1-202ENST00000288398 A0A1W2PN81 502 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 OVOL1O14753 267 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 RAB29O14966 203 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 HSPA12AO43301 675 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 SAP30O75446 220 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 CNTFRP26992 372 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 MC5RP33032 325 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 CHRNA7P36544 502 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 OR3A3P47888 321 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 RAB9AP51151 201 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 RPS27AP62979 156 aaKnown RBP10.94□□□□□ -0.66
TPM1-202ENST00000288398 RUNX1Q01196 453 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 ACSM3Q53FZ2 586 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 LY6G6FQ5SQ64 297 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 SIGIRRQ6IA17 410 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 FAM71F2Q6NXP2 309 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 FAM131AQ6UXB0 335 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 TCTEX1D1Q8N7M0 179 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 PHYHIPQ92561 330 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
TPM1-202ENST00000288398 ASCL2Q99929 193 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 FAAP24Q9BTP7 215 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 TMED9Q9BVK6 235 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 KLK15Q9H2R5 256 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 GNB4Q9HAV0 340 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 ISYNA1Q9NPH2 558 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 PLEKHJ1Q9NW61 149 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 SCOCQ9UIL1 159 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 FOXA2Q9Y261 457 aaPredicted RBP10.94□□□□□ -0.66
TPM1-202ENST00000288398 LSM4Q9Y4Z0 139 aaKnown RBP10.94□□□□□ -0.66
TPM1-202ENST00000288398 A3GALT2U3KPV4 340 aa10.94□□□□□ -0.66
TPM1-202ENST00000288398 IGHV7-81A0A0B4J1V7 117 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 OR5H14A6NHG9 310 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 CHATP28329 748 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 HTR2CP28335 458 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 PPIFP30405 207 aaKnown RBP10.93□□□□□ -0.66
TPM1-202ENST00000288398 RCN1Q15293 331 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 HMGN3Q15651 99 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 HSD17B12Q53GQ0 312 aa10.93□□□□□ -0.66
TPM1-202ENST00000288398 ZNF660Q6AZW8 331 aaPredicted RBP10.93□□□□□ -0.66
TPM1-202ENST00000288398 PYHIN1Q6K0P9 492 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms