RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 HEPN1Q6WQI6 88 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 Q8IYB0 196 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 ZNF251Q9BRH9 671 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 SIRT7Q9NRC8 400 aa10.96□□□□□ -0.66
C9orf3-201ENST00000277198 TRAV24A0A0B4J272 114 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 KIAA1324LA8MWY0 1029 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-201ENST00000277198 H3BQ15 152 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 CST7O76096 145 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 SCAF4O95104 1147 aaKnown RBP10.95□□□□□ -0.66
C9orf3-201ENST00000277198 CNOT4O95628 575 aaKnown RBP10.95□□□□□ -0.66
C9orf3-201ENST00000277198 NGFP01138 241 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 OR8U8P0C7N1 319 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 ARG2P78540 354 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 CCL20P78556 96 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 SLC35E3Q7Z769 313 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 BATF2Q8N1L9 274 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 TCTEX1D2Q8WW35 142 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 NANOS1Q8WY41 292 aaKnown RBP10.95□□□□□ -0.66
C9orf3-201ENST00000277198 HES7Q9BYE0 225 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 TTTY12Q9BZ98 90 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 CRIM1Q9NZV1 1036 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 PUS1Q9Y606 427 aaKnown RBP eCLIP10.95□□□□□ -0.66
C9orf3-201ENST00000277198 SVILO95425 2214 aa10.95□□□□□ -0.66
C9orf3-201ENST00000277198 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 A0A1W2PPE2 198 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ZNF503-AS2A6NEH8 195 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 B4DEV8 164 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 J3QT63 122 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 AP4M1O00189 453 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 WISP2O76076 250 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 CCL2P13500 99 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 DAOP14920 347 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 FABP9Q0Z7S8 132 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 OR1C1Q15619 314 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ADAM5Q6NVV9 412 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 OR10V1Q8NGI7 309 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 CLDND2Q8NHS1 167 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 GPR146Q96CH1 333 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 MUCL1Q96DR8 90 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-201ENST00000277198 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-201ENST00000277198 OR51I2Q9H344 312 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 GP6Q9HCN6 339 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 IL36RNQ9UBH0 155 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 DOPEY2Q9Y3R5 2298 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 hCG_1809904A0A1W2PP81 198 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 A0A1W2PR64 198 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 A0A1W2PRV1 198 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ARG1P05089 322 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 TNFSF10P50591 281 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ICAM4Q14773 271 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 C9orf135Q5VTT2 229 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 C20orf204Q6ZNR8 217 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 MCEMP1Q8IX19 187 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 TVP23CQ96ET8 276 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 TAAR6Q96RI8 345 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 NIPSNAP3BQ9BS92 247 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ABHD14AQ9BUJ0 271 aa10.94□□□□□ -0.66
C9orf3-201ENST00000277198 ERRFI1Q9UJM3 462 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-201ENST00000277198 HSPB6O14558 160 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 CELA3AP09093 270 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 RNF224P0DH78 156 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 MAGEA5P43359 124 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 SERF2P84101 59 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 PMP22Q01453 160 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 ZNF154Q13106 437 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 ZNF429Q86V71 674 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 TMEM251Q8N6I4 163 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 RAB39BQ96DA2 213 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 NCKAP5O14513 1909 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 HIVEP3Q5T1R4 2406 aa10.93□□□□□ -0.66
C9orf3-201ENST00000277198 FAM90A26D6RGX4 464 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 HS3ST1O14792 307 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 EPHA1P21709 976 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 FOXG1P55316 489 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 UBE2KP61086 200 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 PNRC1Q12796 327 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 PMS2P11Q13670 270 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 Q6P435 159 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 SCGB1C1Q8TD33 95 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 MBD3L1Q8WWY6 194 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 RDH5Q92781 318 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 RTL8AQ9BWD3 113 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 TMPRSS5Q9H3S3 457 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 LIN7CQ9NUP9 197 aaKnown RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 POLDIP2Q9Y2S7 368 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 KLF13Q9Y2Y9 288 aaPredicted RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 LIPGQ9Y5X9 500 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 ESPL1Q14674 2120 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 A0A1B0GV50 99 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 A0A1W2PPE3 182 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 TNFSF12O43508 249 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 SYNGR2O43760 224 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 PSG2P11465 335 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 TAGLN2P37802 199 aaKnown RBP10.92□□□□□ -0.66
C9orf3-201ENST00000277198 WNT5AP41221 380 aa10.92□□□□□ -0.66
C9orf3-201ENST00000277198 HBG1P69891 147 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms