RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 IL36RNQ9UBH0 155 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 CXorf1O96002 111 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 FCGR3AP08637 254 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 CEACAM21Q3KPI0 293 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 MYOZ3Q8TDC0 251 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 CEACAM18A8MTB9 384 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 GAPDHP04406 335 aaKnown RBP10.29□□□□□ -0.76
SHPRH-201ENST00000275233 EBLN2Q6P2I7 272 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 LINC00596Q86U02 117 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 FOXJ2Q9P0K8 574 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 VAX2Q9UIW0 290 aa10.29□□□□□ -0.76
SHPRH-201ENST00000275233 PRR33A8MZF0 331 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SULT1A2P50226 295 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 KLF9Q13886 244 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 CTDSPLO15194 276 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 APCSP02743 223 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 HERVK_113P61574 105 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 GABRA6Q16445 453 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 TCTEX1D1Q8N7M0 179 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SNX22Q96L94 193 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 ST6GALNAC2Q9UJ37 374 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 PGA4P0DJD7 388 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 CLDN18P56856 261 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 LGALSLQ3ZCW2 172 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 UNQ5815/PRO19632Q6UWF5 114 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SMPD2O60906 423 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 TSPAN2O60636 221 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 GCSHP23434 173 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 CTSSP25774 331 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 TMEM91Q6ZNR0 172 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SAP25Q8TEE9 199 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 PTX4Q96A99 478 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 SRXN1Q9BYN0 137 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 FAM181BA6NEQ2 426 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 ZIC3O60481 467 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 BTF3P20290 206 aaKnown RBP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 NFAM1Q8NET5 270 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-201ENST00000275233 OR4A5Q8NH83 315 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 METTL26Q96S19 204 aa10.28□□□□□ -0.76
SHPRH-201ENST00000275233 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.76
SHPRH-201ENST00000275233 A0A1B0GU03 582 aa10.27□□□□□ -0.76
SHPRH-201ENST00000275233 SNURFLB1AK76 121 aa10.27□□□□□ -0.76
SHPRH-201ENST00000275233 MDKP21741 143 aaPredicted RBP10.27□□□□□ -0.76
SHPRH-201ENST00000275233 RPL27AP46776 148 aaKnown RBP10.27□□□□□ -0.76
SHPRH-201ENST00000275233 DLX1P56177 255 aa10.27□□□□□ -0.76
SHPRH-201ENST00000275233 RSPO4Q2I0M5 234 aaPredicted RBP10.27□□□□□ -0.76
SHPRH-201ENST00000275233 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.76
SHPRH-201ENST00000275233 DDA1Q9BW61 102 aa10.27□□□□□ -0.76
SHPRH-201ENST00000275233 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 LOC101059948A0A1B0GTJ6 334 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 AHRRA9YTQ3 701 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 PRSS53Q2L4Q9 553 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 STXBP6Q8NFX7 210 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 TLNRD1Q9H1K6 362 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 M0R3E3 92 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 SS18L1O75177 396 aaPredicted RBP10.27□□□□□ -0.77
SHPRH-201ENST00000275233 RNASE1P07998 156 aaKnown RBP10.27□□□□□ -0.77
SHPRH-201ENST00000275233 ASAH2BP0C7U1 165 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 ZNF735P0CB33 412 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 RUNX1Q01196 453 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 ANGPTL4Q9BY76 406 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 RAB33BQ9H082 229 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 QSER1Q2KHR3 1735 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 IGHV3-48P01763 117 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 CBLN2Q8IUK8 224 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 OR10J6PQ8NGY7 276 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 UNC13CQ8NB66 2214 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 ARFGEF1Q9Y6D6 1849 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 HYPMO75409 117 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 SSTR5P35346 364 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 SURF2Q15527 256 aaPredicted RBP10.27□□□□□ -0.77
SHPRH-201ENST00000275233 SLC16A13Q7RTY0 426 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 NUP37Q8NFH4 326 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 TBX15Q96SF7 602 aa10.27□□□□□ -0.77
SHPRH-201ENST00000275233 CIDEAO60543 219 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 HIST1H1BP16401 226 aaKnown RBP10.26□□□□□ -0.77
SHPRH-201ENST00000275233 FAM27BQ5VT28 67 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 AMELYQ99218 206 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 ZFC3H1O60293 1989 aaKnown RBP10.26□□□□□ -0.77
SHPRH-201ENST00000275233 ZNF207O43670 478 aaKnown RBP10.26□□□□□ -0.77
SHPRH-201ENST00000275233 FHL5Q5TD97 284 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 ZCCHC14Q8WYQ9 949 aaKnown RBP10.26□□□□□ -0.77
SHPRH-201ENST00000275233 DNAJC13O75165 2243 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 DLEC1Q9Y238 1755 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 IGHV3-35A0A0C4DH35 117 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 TMEM229AB2RXF0 380 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 H7C2G1 150 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 PTP4A3O75365 173 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 HPRT1P00492 218 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 RAG2P55895 527 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 ELOBQ15370 118 aa10.26□□□□□ -0.77
SHPRH-201ENST00000275233 VKORC1L1Q8N0U8 176 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms