RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 NEU1Q99519 415 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 TCFL5Q9UL49 500 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 TP53TG5Q9Y2B4 290 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 OR6C6A6NF89 314 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 H0Y980 276 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 TRAPPC2LH3BP13 241 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 PAGE4O60829 102 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 NGFP01138 241 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 FGF5P12034 268 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 FOXG1P55316 489 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-202ENST00000273342 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 OR8B8Q15620 311 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 PSMF1Q92530 271 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF552Q9H707 407 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-202ENST00000273342 PROK2Q9HC23 129 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 COL5A1P20908 1838 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-202ENST00000273342 ZFHX4Q86UP3 3567 aa10.99□□□□□ -0.65
COL8A1-202ENST00000273342 A0A1W2PQM1 296 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 NUPR1O60356 82 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 LILRA1O75019 489 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 NAPSAO96009 420 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 IGKV1-5P01602 117 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 RFPL3SP0C7P2 107 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CCL7P80098 99 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 FOXO1Q12778 655 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 WIPI1Q5MNZ9 446 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-202ENST00000273342 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 PCSK4Q6UW60 755 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 IL22RA2Q969J5 263 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CLDN23Q96B33 292 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 OR51I2Q9H344 312 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 PTRH2Q9Y3E5 179 aaKnown RBP10.98□□□□□ -0.65
COL8A1-202ENST00000273342 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 GRIFINA4D1Z8 144 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 KRASP01116 189 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 IFNA1P01562 189 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 Q6ZSR3 168 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 FOXL2NBQ6ZUU3 175 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 TCF23Q7RTU1 214 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 RAB24Q969Q5 203 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 ATP23Q9Y6H3 246 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CLEC18AA5D8T8 446 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CST2P09228 141 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 COL8A2P25067 703 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 S100GP29377 79 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 DSCR4P56555 118 aaPredicted RBP10.98□□□□□ -0.65
COL8A1-202ENST00000273342 SLC38A11Q08AI6 406 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM41BQ5BJD5 291 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CLEC18CQ8NCF0 446 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 WDR61Q9GZS3 305 aaKnown RBP10.98□□□□□ -0.65
COL8A1-202ENST00000273342 CLN8Q9UBY8 286 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 OR2W1Q9Y3N9 320 aa10.98□□□□□ -0.65
COL8A1-202ENST00000273342 KIR2DS1A0A191URI9 304 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 ZNF320A2RRD8 509 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 GYPAP02724 150 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 KIR2DS4P43632 304 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 PSMB3P49720 205 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 KIR2DS1Q14954 304 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 LRRC75BQ2VPJ9 315 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 DPPA3Q6W0C5 159 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 MRPL21Q7Z2W9 205 aaKnown RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 MKXQ8IYA7 352 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 OR10G4Q8NGN3 311 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 MBD3L1Q8WWY6 194 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 OR5P3Q8WZ94 311 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 TAF15Q92804 592 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 SDSLQ96GA7 329 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 NOL4LQ96MY1 436 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 ACTR3CQ9C0K3 210 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 C19orf25Q9UFG5 118 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 DOCK10Q96BY6 2186 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 KBTBD11O94819 623 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 COX5BP10606 129 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 HBG1P69891 147 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 HBG2P69892 147 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 HOXA4Q00056 320 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 LPAL2Q16609 132 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 TDRG1Q3Y452 100 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 SPATA46Q5T0L3 261 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 TCEAL6Q6IPX3 200 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 WDR74Q6RFH5 385 aaPredicted RBP10.97□□□□□ -0.65
COL8A1-202ENST00000273342 CYP2G1PQ6ZSU1 146 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 DERL1Q9BUN8 251 aa10.97□□□□□ -0.65
COL8A1-202ENST00000273342 DSPP15924 2871 aaKnown RBP10.96□□□□□ -0.65
COL8A1-202ENST00000273342 SIRPB1O00241 398 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 RHBDL1O75783 438 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 DKK1O94907 266 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 RAC1P63000 192 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 GTF3C1Q12789 2109 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 GVINP1Q7Z2Y8 2422 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 CCDC74BQ96LY2 380 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 PRRG4Q9BZD6 226 aa10.96□□□□□ -0.65
COL8A1-202ENST00000273342 MSL2Q9HCI7 577 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms