RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 GMPPAQ96IJ6 420 aaPredicted RBP16.98■□□□□ 0.31
CSPG5-201ENST00000264723 BARX1Q9HBU1 254 aaPredicted RBP16.98■□□□□ 0.31
CSPG5-201ENST00000264723 CACNA1AO00555 2505 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 ERVS71-1P61550 626 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 HGFACQ04756 655 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 CEACAM21Q3KPI0 293 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 SLC25A53Q5H9E4 307 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 NCR3LG1Q68D85 454 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 FAM210BQ96KR6 192 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 SNX22Q96L94 193 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 IGHV3OR15-7A0A075B7D8 119 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 IGKV1D-13A0A0B4J2D9 117 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 DBX1A6NMT0 343 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 IGKV1-13P0DP09 117 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 BATFQ16520 125 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 FBLN5Q9UBX5 448 aa16.98■□□□□ 0.31
CSPG5-201ENST00000264723 G6PCP35575 357 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 HLA-DRB3P79483 266 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 OR2W1Q9Y3N9 320 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 NKX6-3A6NJ46 265 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 F2RP25116 425 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 HOXA6P31267 233 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 MOGAT3Q86VF5 341 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 LYG1Q8N1E2 194 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 NABP1Q96AH0 204 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 S1PR3Q99500 378 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 SERTAD4Q9NUC0 356 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 RHBDL1O75783 438 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 CHRNA7P36544 502 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 KLF3P57682 345 aaPredicted RBP16.97■□□□□ 0.31
CSPG5-201ENST00000264723 BTNL8Q6UX41 500 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 SELENOHQ8IZQ5 122 aaKnown RBP16.97■□□□□ 0.31
CSPG5-201ENST00000264723 ATP5SQ99766 215 aa16.97■□□□□ 0.31
CSPG5-201ENST00000264723 HAND1O96004 215 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 PMELP40967 661 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 GPR146Q96CH1 333 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 VCANP13611 3396 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 TRGC2P03986 189 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 OR8U8P0C7N1 319 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 KCNMB1Q16558 191 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 DOPEY2Q9Y3R5 2298 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 hCG_38984A0A1B0GV85 526 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 PGLYRP1O75594 196 aaPredicted RBP16.96■□□□□ 0.31
CSPG5-201ENST00000264723 SCGB1D1O95968 90 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 UCP2P55851 309 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 TAS2R30P59541 319 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 BHLHA15Q7RTS1 189 aaPredicted RBP16.96■□□□□ 0.31
CSPG5-201ENST00000264723 LIME1Q9H400 295 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 PATZ1Q9HBE1 687 aaKnown RBP16.96■□□□□ 0.31
CSPG5-201ENST00000264723 CLN8Q9UBY8 286 aa16.96■□□□□ 0.31
CSPG5-201ENST00000264723 TGIF2-C20orf24A0A0A6YYL0 155 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 OR5H1A6NKK0 313 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 FAM90A27PA6NNH2 459 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 TSTD3H0UI37 97 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 ZNF737O75373 536 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 Q0VFX4 171 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 EDARADDQ8WWZ3 215 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 BOD1Q96IK1 185 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 RAB40CQ96S21 281 aa16.96■□□□□ 0.3
CSPG5-201ENST00000264723 SZT2Q5T011 3432 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 FGF12P61328 243 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 CCL1P22362 96 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 LRRC3CA6NJW4 275 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 IL24Q13007 206 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 FFAR4Q5NUL3 377 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 OR13D1Q8NGV5 346 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 MTCH1Q9NZJ7 389 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 SEMA5BQ9P283 1151 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 RPH3ALQ9UNE2 315 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 NOTCH3Q9UM47 2321 aa16.95■□□□□ 0.3
CSPG5-201ENST00000264723 A0A1W2PPE3 182 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 NEURL1O76050 574 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 CD59P13987 128 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 RPL19P84098 196 aaKnown RBP16.94■□□□□ 0.3
CSPG5-201ENST00000264723 TNFAIP6P98066 277 aaPredicted RBP16.94■□□□□ 0.3
CSPG5-201ENST00000264723 ZNF385CQ66K41 422 aaPredicted RBP16.94■□□□□ 0.3
CSPG5-201ENST00000264723 ZNF66Q6ZN08 573 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 TMEM204Q9BSN7 226 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 CLDN34H7C241 214 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 AQP7O14520 342 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 MT-CO2P00403 227 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 FOXO1Q12778 655 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 MST1LQ2TV78 715 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 WDR25Q64LD2 544 aaPredicted RBP16.94■□□□□ 0.3
CSPG5-201ENST00000264723 PINX1Q96BK5 328 aaKnown RBP16.94■□□□□ 0.3
CSPG5-201ENST00000264723 HS3ST6Q96QI5 342 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 OR10X1Q8NGY0 326 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 CXXC4Q9H2H0 198 aa16.94■□□□□ 0.3
CSPG5-201ENST00000264723 TRBV6-7A0A0A0MS04 114 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 SLC25A6P12236 298 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 MPZP25189 248 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 Q9N2K0 584 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 BTBD17A6NE02 478 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 TFF1P04155 84 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 CCL8P80075 99 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 PLCE1Q9P212 2302 aa16.93■□□□□ 0.3
CSPG5-201ENST00000264723 IGLV3-32A0A0A0MS00 114 aa16.92■□□□□ 0.3
CSPG5-201ENST00000264723 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
CSPG5-201ENST00000264723 LY6G6EA0A0G2JKS1 128 aa16.92■□□□□ 0.3
CSPG5-201ENST00000264723 DLL3Q9NYJ7 618 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms