RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ABHD14AQ9BUJ0 271 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 RIMS4Q9H426 269 aaPredicted RBP12.69□□□□□ -0.38
USE1-201ENST00000263897 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 BLOC1S6Q9UL45 172 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 RAB26Q9ULW5 256 aa12.69□□□□□ -0.38
USE1-201ENST00000263897 PF4P02776 101 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
USE1-201ENST00000263897 GPR12P47775 334 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 PSMD7P51665 324 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 F2RL1P55085 397 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 TBCEQ15813 527 aaPredicted RBP12.68□□□□□ -0.38
USE1-201ENST00000263897 RAB11BQ15907 218 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 KHDC1LQ5JSQ8 128 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 Q6ZPA2 131 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 STPG2Q8N412 459 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 OR51D1Q8NGF3 324 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 RBMXL1Q96E39 390 aaKnown RBP12.68□□□□□ -0.38
USE1-201ENST00000263897 RASL11BQ9BPW5 248 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
USE1-201ENST00000263897 HSF4Q9ULV5 492 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 V9GY05 133 aa12.68□□□□□ -0.38
USE1-201ENST00000263897 TRBV6-6A0A0A6YYG2 114 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 AP4M1O00189 453 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 PRB2P02812 416 aaPredicted RBP12.67□□□□□ -0.38
USE1-201ENST00000263897 RANBP1P43487 201 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 TMEM50BP56557 158 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 SLC35B1P78383 322 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 LSAMPQ13449 338 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 C2orf76Q3KRA6 126 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 FAM71E2Q8N5Q1 922 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 COMMD1Q8N668 190 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 FAM3DQ96BQ1 224 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 ZFP57Q9NU63 452 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 AK3Q9UIJ7 227 aa12.67□□□□□ -0.38
USE1-201ENST00000263897 FOXI3A8MTJ6 420 aaPredicted RBP12.66□□□□□ -0.38
USE1-201ENST00000263897 IGLL1P15814 213 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 CLDN12P56749 244 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
USE1-201ENST00000263897 SSX1Q16384 188 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 PNLIPRP3Q17RR3 467 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 ZNF367Q7RTV3 350 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 REC114Q7Z4M0 266 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 PHF21AQ96BD5 680 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 GON7Q9BXV9 100 aa12.66□□□□□ -0.38
USE1-201ENST00000263897 LDLRAD4O15165 306 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 ATP6V1G2O95670 118 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 SOX6P35712 828 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 OR3A3P47888 321 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 VEGFCP49767 419 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 ZNF833PQ6ZTB9 187 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 NABP2Q9BQ15 211 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 HDHD3Q9BSH5 251 aaPredicted RBP12.65□□□□□ -0.38
USE1-201ENST00000263897 MRPL20Q9BYC9 149 aaKnown RBP12.65□□□□□ -0.38
USE1-201ENST00000263897 NECAP2Q9NVZ3 263 aa12.65□□□□□ -0.38
USE1-201ENST00000263897 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 TRAV1-2A0A0B4J238 106 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 DENRO43583 198 aaKnown RBP12.64□□□□□ -0.39
USE1-201ENST00000263897 MRPS14O60783 128 aaKnown RBP12.64□□□□□ -0.39
USE1-201ENST00000263897 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
USE1-201ENST00000263897 SLC6A1P30531 599 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 FOXB2Q5VYV0 432 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 CD200R1LQ6Q8B3 271 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 RCC1LQ96I51 464 aaKnown RBP12.64□□□□□ -0.39
USE1-201ENST00000263897 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 RITA1Q96K30 269 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 PECRQ9BY49 303 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 IFI27L2Q9H2X8 130 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 Q9N2K0 584 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 NDUFB11Q9NX14 153 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 SLC23A1Q9UHI7 598 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 RAB22AQ9UL26 194 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 MGAT4AQ9UM21 535 aa12.64□□□□□ -0.39
USE1-201ENST00000263897 PRKDCP78527 4128 aaKnown RBP12.64□□□□□ -0.39
USE1-201ENST00000263897 TMEM272A0A1B0GTI8 110 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 TRDV1A0A1B0GX56 115 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 ITGB1BP1O14713 200 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 PDCD5O14737 125 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 RAB29O14966 203 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 ST8SIA5O15466 376 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
USE1-201ENST00000263897 THBS3P49746 956 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 GABARAPL2P60520 117 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 ACTBP60709 375 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 MMDQ15546 238 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 PLAC9Q5JTB6 97 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 HES5Q5TA89 166 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 ETV3LQ6ZN32 361 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 C18orf65Q6ZTR6 163 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 MRPL41Q8IXM3 137 aaKnown RBP12.63□□□□□ -0.39
USE1-201ENST00000263897 LINC00482Q8N8I6 264 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 ZNF251Q9BRH9 671 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms