RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CEACAM18A8MTB9 384 aa22.86■■□□□ 1.25
SMARCD3-201ENST00000262188 OR3A1P47881 315 aa22.86■■□□□ 1.25
SMARCD3-201ENST00000262188 PDLIM4P50479 330 aa22.86■■□□□ 1.25
SMARCD3-201ENST00000262188 RAB5CP51148 216 aa22.86■■□□□ 1.25
SMARCD3-201ENST00000262188 SMCO4Q9NRQ5 59 aa22.86■■□□□ 1.25
SMARCD3-201ENST00000262188 DGCR2P98153 550 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 FABP9Q0Z7S8 132 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 FAM168AQ92567 244 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 SDSLQ96GA7 329 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 OPN4Q9UHM6 478 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 IGHV4-30-2A0A087WSY4 118 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 A0A0A6YYH2 397 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 A6NJ64 397 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 LMO1P25800 156 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 FAM189A2Q15884 450 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 C9orf152Q5JTZ5 239 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 ZNF665Q9H7R5 613 aa22.85■■□□□ 1.25
SMARCD3-201ENST00000262188 TRAV39A0A0B4J263 110 aa22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 RBBP9O75884 186 aa22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 RCC1P18754 421 aaPredicted RBP22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 EDDM3AQ14507 147 aa22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 GGACTQ9BVM4 153 aa22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 HSF4Q9ULV5 492 aa22.84■■□□□ 1.25
SMARCD3-201ENST00000262188 SCGNO76038 276 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 IFNA2P01563 188 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 AESQ08117 197 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 CLEC2AQ6UVW9 174 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 Q6ZPA2 131 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 C5orf24Q7Z6I8 188 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 C10orf105Q8TEF2 133 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 MAFIPQ8WZ33 124 aa22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 MYOZ1Q9NP98 299 aaPredicted RBP22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 BEX4Q9NWD9 120 aaPredicted RBP22.83■■□□□ 1.25
SMARCD3-201ENST00000262188 SIGLEC5O15389 551 aa22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 ANXA7P20073 488 aaKnown RBP22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 IL13RA1P78552 427 aa22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 ARFRP1Q13795 201 aa22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 ATPAF1Q5TC12 328 aaPredicted RBP22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 NUDT16L1Q9BRJ7 211 aaKnown RBP22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 ZNF230Q9UIE0 474 aaPredicted RBP22.83■■□□□ 1.24
SMARCD3-201ENST00000262188 NKX6-3A6NJ46 265 aa22.82■■□□□ 1.24
SMARCD3-201ENST00000262188 BLOC1S1P78537 153 aa22.82■■□□□ 1.24
SMARCD3-201ENST00000262188 OR52I2Q8NH67 350 aa22.82■■□□□ 1.24
SMARCD3-201ENST00000262188 SPACA1Q9HBV2 294 aa22.82■■□□□ 1.24
SMARCD3-201ENST00000262188 GFOD1Q9NXC2 390 aa22.82■■□□□ 1.24
SMARCD3-201ENST00000262188 BAHCC1Q9P281 2608 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 TXNL1O43396 289 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 TK1P04183 234 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 CD3GP09693 182 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 PCP4P48539 62 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 SMIM4Q8WVI0 70 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 COQ2Q96H96 371 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 MFFQ9GZY8 342 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 K7N7A8 449 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 GSTP1P09211 210 aaKnown RBP22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 CLEC12BQ2HXU8 276 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 GVQW1Q8N7I0 195 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 POM121Q96HA1 1249 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 GINS4Q9BRT9 223 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 TOLLIPQ9H0E2 274 aa22.81■■□□□ 1.24
SMARCD3-201ENST00000262188 DVL1O14640 695 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 MT-ND4LP03901 98 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 RPS2P15880 293 aaKnown RBP22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 ADCYAP1P18509 176 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 PRSS3P35030 304 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 CEACAM6P40199 344 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 ZNF345Q14585 488 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 ARRDC1Q8N5I2 433 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 OR4K15Q8NH41 348 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 CCDC107Q8WV48 283 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 SNX22Q96L94 193 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 DCTN5Q9BTE1 182 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 KLK11Q9UBX7 282 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 AP4M1O00189 453 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 SPDEFO95238 335 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 GLIPR1P48060 266 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 DNM1P46Q6ZS02 220 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 SLC36A1Q7Z2H8 476 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 TRAPPC6BQ86SZ2 158 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 MUC20Q8N307 709 aaPredicted RBP22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 PIMREGQ9BSJ6 248 aa22.8■■□□□ 1.24
SMARCD3-201ENST00000262188 TCAPO15273 167 aa22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 MT-ND4P03905 459 aa22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 MELTFP08582 738 aa22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 NDUFB7P17568 137 aa22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 RBMS2Q15434 407 aaKnown RBP22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 UNKLQ9H9P5 680 aaKnown RBP22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 SLC25A10Q9UBX3 287 aaPredicted RBP22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 PCDHB10Q9UN67 800 aa22.79■■□□□ 1.24
SMARCD3-201ENST00000262188 MED13LQ71F56 2210 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 FXYD6-FXYD2A0A087WZ82 144 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 SERPINE3A8MV23 424 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 EDDM3BP56851 147 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 TMEM155Q4W5P6 130 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 MBD6Q96DN6 1003 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 FXYD6Q9H0Q3 95 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 TUBA4BQ9H853 241 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 ZNF69Q9UC07 566 aa22.78■■□□□ 1.24
SMARCD3-201ENST00000262188 KIAA2026Q5HYC2 2103 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms