RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ZNF826PQ6ZT77 177 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PPP1R32Q7Z5V6 425 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MDP1Q86V88 176 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 LRP11Q86VZ4 500 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR2M7Q8NG81 312 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR10G4Q8NGN3 311 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR10G9Q8NGN4 311 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR10G7Q8NGN6 311 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 SIGLEC12Q96PQ1 595 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM204Q9BSN7 226 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ARRDC1-AS1Q9H2J1 176 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM9BQ9NQ34 198 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ZDHHC8Q9ULC8 765 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PSG11Q9UQ72 335 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TP53TG5Q9Y2B4 290 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PTPRSQ13332 1948 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 A0A1B0GU03 582 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ZNF320A2RRD8 509 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 XKRY2A2RUG3 117 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR5H1A6NKK0 313 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR5B21A6NL26 309 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM50AO95807 157 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 SLC25A6P12236 298 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 AGAP20933 346 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 UCP1P25874 307 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 GALR1P47211 349 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 CDX1P47902 265 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 ERVFRD-1P60508 538 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TRA2AQ13595 282 aaKnown RBP eCLIP4.05□□□□□ -1.76
USP44-201ENST00000258499 ICAM4Q14773 271 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 KCNIP4Q6PIL6 250 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 DHRS13Q6UX07 377 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 DEFB108BQ8NET1 73 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR4A16Q8NH70 328 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PINX1Q96BK5 328 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 RCC1LQ96I51 464 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 WFIKKN1Q96NZ8 548 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 SPOCK3Q9BQ16 436 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ACTR3CQ9C0K3 210 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 VSIRQ9H7M9 311 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 RNF122Q9H9V4 155 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 SEMA5BQ9P283 1151 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 VAX2Q9UIW0 290 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PILRBQ9UKJ0 227 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PCNX1Q96RV3 2341 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 A0A087X0M5 115 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 A0A0G2JRQ6 117 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 A0A1B0GX30 115 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 CXorf65A6NEN9 183 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 K7ESF4 209 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 ETV2O00321 342 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 PAGE4O60829 102 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 LILRA1O75019 489 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 OR2H2O95918 312 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MT-CO3P00414 261 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MMP7P09237 267 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 DEFA4P12838 97 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MEOX1P50221 254 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 CCL11P51671 97 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 NUFIP2Q7Z417 695 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 GGNQ86UU5 652 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 H1FOOQ8IZA3 346 aaPredicted RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 FGFRL1Q8N441 504 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 TMEM251Q8N6I4 163 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MRPL30Q8TCC3 161 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 TRIB1Q96RU8 372 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 REPIN1Q9BWE0 567 aaKnown RBP4.05□□□□□ -1.76
USP44-201ENST00000258499 PRDM14Q9GZV8 571 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MSL2Q9HCI7 577 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 PRDM6Q9NQX0 595 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 FUT9Q9Y231 359 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 MPC1Q9Y5U8 109 aa4.05□□□□□ -1.76
USP44-201ENST00000258499 LOC102723996A0A087X1L8 192 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 J3QT63 122 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 FCGR3BO75015 233 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TFF1P04155 84 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PPP1CBP62140 327 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PMS2P11Q13670 270 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 GAMTQ14353 236 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 RTP5Q14D33 572 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SSX2Q16385 188 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 HEPN1Q6WQI6 88 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SLC35E3Q7Z769 313 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 MRGPRGQ86SM5 289 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 LRTM2Q8N967 370 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OR10A7Q8NGE5 316 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OR52L2PQ8NGH6 319 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 OR1L1Q8NH94 360 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CLDND2Q8NHS1 167 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 MUCL1Q96DR8 90 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 ABHD14BQ96IU4 210 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TTTY12Q9BZ98 90 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TUBA4BQ9H853 241 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 PROK2Q9HC23 129 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.04□□□□□ -1.76
USP44-201ENST00000258499 TRGV5A0A0B4J1U4 118 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 MDFIC2A0A1B0GVS7 189 aa4.04□□□□□ -1.76
USP44-201ENST00000258499 TMEM30CPA0ZSE6 113 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms