RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MTCH1Q9NZJ7 389 aa10.62□□□□□ -0.71
USP30-201ENST00000257548 C19orf25Q9UFG5 118 aaPredicted RBP10.62□□□□□ -0.71
USP30-201ENST00000257548 HS3ST3A1Q9Y663 406 aa10.62□□□□□ -0.71
USP30-201ENST00000257548 DEFB108AA8MXU0 73 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 MSMO1Q15800 293 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 SYT13Q7L8C5 426 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 NUFIP2Q7Z417 695 aaKnown RBP10.61□□□□□ -0.71
USP30-201ENST00000257548 OR2V1Q8NHB1 315 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 C1orf147Q96MC9 270 aaPredicted RBP10.61□□□□□ -0.71
USP30-201ENST00000257548 WNT10AQ9GZT5 417 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 RPH3ALQ9UNE2 315 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 SPTBN1Q01082 2364 aaKnown RBP10.61□□□□□ -0.71
USP30-201ENST00000257548 TRAV38-1A0A0B4J264 116 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 TMEM50AO95807 157 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 GALNSP34059 522 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 HES3Q5TGS1 186 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 OR5R1Q8NH85 324 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 NBASA2RRP1 2371 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 A0A1W2PQD3 144 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 SNURFLB1AK76 121 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 IL15RAQ13261 267 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 MRPL54Q6P161 138 aaKnown RBP10.61□□□□□ -0.71
USP30-201ENST00000257548 CPT1CQ8TCG5 803 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 UHRF2Q96PU4 802 aa10.61□□□□□ -0.71
USP30-201ENST00000257548 ANKRD30BLA7E2S9 258 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 ZNF253O75346 499 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 MRPL33O75394 65 aaKnown RBP10.6□□□□□ -0.71
USP30-201ENST00000257548 DRD1P21728 446 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 F2RP25116 425 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 RPL23P62829 140 aaKnown RBP10.6□□□□□ -0.71
USP30-201ENST00000257548 PHYHD1Q5SRE7 291 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 CXorf67Q86X51 503 aaPredicted RBP10.6□□□□□ -0.71
USP30-201ENST00000257548 SSMEM1Q8WWF3 244 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 ZNF552Q9H707 407 aaPredicted RBP10.6□□□□□ -0.71
USP30-201ENST00000257548 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 DLEU1O43261 78 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 CHRNB4P30926 498 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 MMDQ15546 238 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 ZNF596Q8TC21 504 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 TECTBQ96PL2 329 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 MTCH2Q9Y6C9 303 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 ZIC3O60481 467 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 NXPH2O95156 264 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 G6PCP35575 357 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 CEACAM6P40199 344 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 GABRA2P47869 451 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
USP30-201ENST00000257548 RAB7AP51149 207 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 EDDM3AQ14507 147 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 PRR31Q5SQ13 230 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 PRR27Q6MZM9 219 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 FAM89BQ8N5H3 189 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 FAM131CQ96AQ9 280 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 AP1S3Q96PC3 154 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 B3GAT1Q9P2W7 334 aa10.6□□□□□ -0.71
USP30-201ENST00000257548 TICRRQ7Z2Z1 1910 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 BCAT2O15382 392 aaPredicted RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 SRSF10O75494 262 aaKnown RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 P04436 131 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 CELA2AP08217 269 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 GCH1P30793 250 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 SHHQ15465 462 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 FOXB1Q99853 325 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 CISD1Q9NZ45 108 aaKnown RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 CLDN16Q9Y5I7 305 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 SLC22A20A6NK97 555 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 SLC17A3O00476 420 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 CA6P23280 308 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 TRA2AQ13595 282 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP30-201ENST00000257548 FAM90A2PQ658T7 463 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP30-201ENST00000257548 APH1AQ96BI3 265 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 C18orf12Q96KH6 178 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 DIRC2Q96SL1 478 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 ARL2-SNX15V9GYD0 113 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 CADP27708 2225 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 IGHV3-43A0A0B4J1X8 118 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 EFNA2O43921 213 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 PGLYRP1O75594 196 aaPredicted RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 KBTBD11O94819 623 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 C1QTNF9P0C862 333 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 IGHV3-43DP0DP04 118 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 SELEP16581 610 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 GDF1P27539 372 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 HOXA6P31267 233 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 RBM11P57052 281 aaKnown RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 IGLV3-21P80748 117 aaPredicted RBP10.59□□□□□ -0.71
USP30-201ENST00000257548 IGFBP7Q16270 282 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 CADM4Q8NFZ8 388 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 RHBDD1Q8TEB9 315 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 ACY3Q96HD9 319 aa10.59□□□□□ -0.71
USP30-201ENST00000257548 A0A1W2PPC4 97 aa10.58□□□□□ -0.72
USP30-201ENST00000257548 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
USP30-201ENST00000257548 M0QZK8 103 aa10.58□□□□□ -0.72
USP30-201ENST00000257548 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
USP30-201ENST00000257548 HSBP1O75506 76 aa10.58□□□□□ -0.72
USP30-201ENST00000257548 CER1O95813 267 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms