RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PECRQ9BY49 303 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 TXNL4BQ9NX01 149 aaKnown RBP18.23■□□□□ 0.51
LSM4-201ENST00000252816 RAB22AQ9UL26 194 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 SMIM30A4D0T7 59 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 ADARB2-AS1A8MUL3 147 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 FGF9P31371 208 aaPredicted RBP18.22■□□□□ 0.51
LSM4-201ENST00000252816 RANBP1P43487 201 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 NSUN5P1Q3KNT7 163 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 LY6G6FQ5SQ64 297 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 MOB1BQ7L9L4 216 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 OR5AU1Q8NGC0 362 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 OR56B1Q8NGI3 324 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 IL1F10Q8WWZ1 152 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 RIMS4Q9H426 269 aaPredicted RBP18.22■□□□□ 0.51
LSM4-201ENST00000252816 ABRACLQ9P1F3 81 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 STUB1Q9UNE7 303 aa18.22■□□□□ 0.51
LSM4-201ENST00000252816 FGF16O43320 207 aa18.21■□□□□ 0.51
LSM4-201ENST00000252816 CD1BP29016 333 aa18.21■□□□□ 0.51
LSM4-201ENST00000252816 MOGAT2Q3SYC2 334 aa18.21■□□□□ 0.51
LSM4-201ENST00000252816 KCTD21Q4G0X4 260 aa18.21■□□□□ 0.51
LSM4-201ENST00000252816 CENPVQ7Z7K6 275 aaPredicted RBP18.21■□□□□ 0.51
LSM4-201ENST00000252816 KCNK7Q9Y2U2 307 aa18.21■□□□□ 0.51
LSM4-201ENST00000252816 TXNL1O43396 289 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 LANCL1O43813 399 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 TCTEX1D4Q5JR98 221 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 C10orf99Q6UWK7 81 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 NDUFA11Q86Y39 141 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 OR2T10Q8NGZ9 312 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 PARP12Q9H0J9 701 aaKnown RBP18.2■□□□□ 0.5
LSM4-201ENST00000252816 OR51E2Q9H255 320 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 Q9N2K0 584 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 C12orf4Q9NQ89 552 aa18.2■□□□□ 0.5
LSM4-201ENST00000252816 RGS11O94810 467 aa18.19■□□□□ 0.5
LSM4-201ENST00000252816 SLC2A2P11168 524 aaPredicted RBP18.19■□□□□ 0.5
LSM4-201ENST00000252816 OR3A3P47888 321 aa18.19■□□□□ 0.5
LSM4-201ENST00000252816 CD83Q01151 205 aa18.19■□□□□ 0.5
LSM4-201ENST00000252816 CMSS1Q9BQ75 279 aaKnown RBP18.19■□□□□ 0.5
LSM4-201ENST00000252816 IFI27L2Q9H2X8 130 aa18.19■□□□□ 0.5
LSM4-201ENST00000252816 PLSCR3Q9NRY6 295 aa18.19■□□□□ 0.5
LSM4-201ENST00000252816 MOSP00540 346 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 HLA-DRB3P79483 266 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 LSAMPQ13449 338 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 NEDD8Q15843 81 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 OR2AK2Q8NG84 335 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 RAB3CQ96E17 227 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 MRPL20Q9BYC9 149 aaKnown RBP18.18■□□□□ 0.5
LSM4-201ENST00000252816 SSR3Q9UNL2 185 aa18.18■□□□□ 0.5
LSM4-201ENST00000252816 NCBP2LA6PVI3 153 aaKnown RBP18.17■□□□□ 0.5
LSM4-201ENST00000252816 RAB27BO00194 218 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 ST8SIA5O15466 376 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 SCTP09683 121 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 RAB6AP20340 208 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 ZNF833PQ6ZTB9 187 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 Q8N9W7 124 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 OR10R2Q8NGX6 335 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 OR1A1Q9P1Q5 309 aa18.17■□□□□ 0.5
LSM4-201ENST00000252816 SAA2-SAA4A0A096LPE2 208 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 NOTOA8MTQ0 251 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 OPN1MWP04001 364 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 SAA2P0DJI9 122 aaPredicted RBP18.16■□□□□ 0.5
LSM4-201ENST00000252816 OPN1MW2P0DN77 364 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 OPN1MW3P0DN78 364 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 F2RL1P55085 397 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 NOL4LQ96MY1 436 aaPredicted RBP18.16■□□□□ 0.5
LSM4-201ENST00000252816 NABP2Q9BQ15 211 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 RNF167Q9H6Y7 350 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 SLC23A1Q9UHI7 598 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 MGAT4AQ9UM21 535 aa18.16■□□□□ 0.5
LSM4-201ENST00000252816 IGKV1-6A0A0C4DH72 117 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 LINC01548A6NM66 108 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 MFNGO00587 321 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 KCNAB3O43448 404 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 IGHG2P01859 326 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 GNB3P16520 340 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 GADD45AP24522 165 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 TPRA1Q86W33 373 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 S1PR3Q99500 378 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 ZNF251Q9BRH9 671 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 CHCHD6Q9BRQ6 235 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 LINC00527Q9UJ94 153 aa18.15■□□□□ 0.5
LSM4-201ENST00000252816 A0A1W2PRX2 142 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 CD3GP09693 182 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 SDC2P34741 201 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 CEACAM6P40199 344 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 DEFA6Q01524 100 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 SLC35E3Q7Z769 313 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 ZNF329Q86UD4 541 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 PTX4Q96A99 478 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 R3HDM4Q96D70 268 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 AGMATQ9BSE5 352 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 ABCG5Q9H222 651 aa18.14■□□□□ 0.49
LSM4-201ENST00000252816 LIN7CQ9NUP9 197 aaKnown RBP18.14■□□□□ 0.49
LSM4-201ENST00000252816 A0A075B6Q4 140 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 TCRBV4S1A1TA0A5B7 111 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 SERPINE3A8MV23 424 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 TRDCB7Z8K6 153 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 ITGB1BP1O14713 200 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 WIPF1O43516 503 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 CLEC2LP0C7M8 214 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 HIST1H1DP16402 221 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms