RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 CXorf58Q96LI9 332 aa10.46□□□□□ -0.73
ZKSCAN3-201ENST00000252211 TXN2Q99757 166 aa10.46□□□□□ -0.73
ZKSCAN3-201ENST00000252211 COL4A6Q14031 1691 aa10.46□□□□□ -0.73
ZKSCAN3-201ENST00000252211 NYNRINQ9P2P1 1898 aaKnown RBP10.46□□□□□ -0.73
ZKSCAN3-201ENST00000252211 MYO7BQ6PIF6 2116 aa10.46□□□□□ -0.73
ZKSCAN3-201ENST00000252211 IGHV3-72A0A0B4J1Y9 119 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 A0A1B0GU03 582 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RPL27AP46776 148 aaKnown RBP10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 BTN1A1Q13410 526 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF561Q8N587 486 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 BVESQ8NE79 360 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 OR9G1Q8NH87 305 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ABHD14BQ96IU4 210 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 HSF4Q9ULV5 492 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 IGKV1D-43A0A0B4J1Z2 117 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 CHEK1O14757 476 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NPY1RP25929 384 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RPL7L1Q6DKI1 246 aaKnown RBP10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RHOVQ96L33 236 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SPRR3Q9UBC9 169 aa10.46□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ADAM11O75078 769 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 INHBBP09529 407 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PSG2P11465 335 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 IGSF11Q5DX21 431 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 VAX1Q5SQQ9 334 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 FBLIM1Q8WUP2 373 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SCMH1Q96GD3 660 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RNF2Q99496 336 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 WASHC3Q9Y3C0 194 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NKX2-6A6NCS4 301 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 TMEM8BA6NDV4 472 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF729A6NN14 1252 aaPredicted RBP10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF90Q03938 601 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SCTP09683 121 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 BAGE3Q86Y29 109 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 BAGE2Q86Y30 109 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF680Q8NEM1 530 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 OR1L1Q8NH94 360 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 FAM168AQ92567 244 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MRPL24Q96A35 216 aaKnown RBP10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF837Q96EG3 531 aaPredicted RBP10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PARP11Q9NR21 331 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 hCG_38984A0A1B0GV85 526 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 DUXBA0A1W2PPF3 345 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NBL1P41271 181 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 KLF9Q13886 244 aaPredicted RBP10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ABHD12Q8N2K0 398 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PRR13Q9NZ81 148 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 GAB2Q9UQC2 676 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 URGCP-MRPS24S4R325 110 aa10.45□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZG16O60844 167 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NPIPB7O75200 414 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SLC25A5P05141 298 aaKnown RBP10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 APELAP0DMC3 54 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 TIMP3P35625 211 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PJVKQ0ZLH3 352 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SIGIRRQ6IA17 410 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 CD200R1LQ6Q8B3 271 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 DYNLRB2Q8TF09 96 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 CLEC7AQ9BXN2 247 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RTN4RQ9BZR6 473 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 FBXL17Q9UF56 701 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PIN1P1O15428 100 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SPP1P10451 314 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NHLH1Q02575 133 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PSG7Q13046 419 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 EXOSC2Q13868 293 aaKnown RBP10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PLA2G2CQ5R387 149 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 LRRC75AQ8NAA5 344 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 OR1B1Q8NGR6 318 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 POM121Q96HA1 1249 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 TMEM231Q9H6L2 316 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 CACNA1DQ01668 2161 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MAP1LC3B2A6NCE7 125 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 RCC1P18754 421 aaPredicted RBP10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ERVS71-1P61550 626 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ZNF154Q13106 437 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 UNQ9370/PRO34162Q6UXP9 181 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MAP1LC3BQ9GZQ8 125 aa10.44□□□□□ -0.74
ZKSCAN3-201ENST00000252211 SMIM17P0DL12 118 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 P2RY1P47900 373 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NPBWR2P48146 333 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 PAFAH1B2P68402 229 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 NCR3LG1Q68D85 454 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 GLRX5Q86SX6 157 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 Q96M66 194 aa10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 MRPL13Q9BYD1 178 aaKnown RBP10.43□□□□□ -0.74
ZKSCAN3-201ENST00000252211 ASCL3Q9NQ33 180 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms