RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 Q6ZPA2 131 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 TGIF2LXQ8IUE1 241 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 LYG1Q8N1E2 194 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 HDHD3Q9BSH5 251 aaPredicted RBP19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 RNF167Q9H6Y7 350 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 SIGLEC9Q9Y336 463 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 MOB4Q9Y3A3 225 aa19.46■□□□□ 0.71
SDF2L1-201ENST00000248958 MFNGO00587 321 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 LANCL1O43813 399 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 HIST1H1DP16402 221 aaKnown RBP19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 TMEM11P17152 192 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 CD1BP29016 333 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 KRTAP10-3P60369 221 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 SRSF4Q08170 494 aaKnown RBP19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 EBI3Q14213 229 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 HERPUD1Q15011 391 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 PRR31Q5SQ13 230 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 CROCCP3Q8IVE0 287 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 IZUMO1Q8IYV9 350 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 OR2AK2Q8NG84 335 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 GHITMQ9H3K2 345 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 KCNK7Q9Y2U2 307 aa19.45■□□□□ 0.7
SDF2L1-201ENST00000248958 ITGB1BP1O14713 200 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 IGKV1D-33P01593 117 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 IGKV1-33P01594 117 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 ZBTB25P24278 435 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 REG1BP48304 166 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 C5orf24Q7Z6I8 188 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 SERTAD4Q9NUC0 356 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 ETV7Q9Y603 341 aa19.44■□□□□ 0.7
SDF2L1-201ENST00000248958 TRDCB7Z8K6 153 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 FGF16O43320 207 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 PEX14O75381 377 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 GNB3P16520 340 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 KIR2DS1Q14954 304 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 KLHDC1Q8N7A1 406 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 OR2T10Q8NGZ9 312 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 EDARADDQ8WWZ3 215 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 PIPOXQ9P0Z9 390 aa19.43■□□□□ 0.7
SDF2L1-201ENST00000248958 HSPA12AO43301 675 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 CLEC2LP0C7M8 214 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 SNRPBP14678 240 aaKnown RBP19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 VDAC2P45880 294 aaPredicted RBP19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 ARFRP1Q13795 201 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 SRSF7Q16629 238 aaKnown RBP eCLIP19.42■□□□□ 0.73e-31■■■□□ 14.9
SDF2L1-201ENST00000248958 IDNKQ5T6J7 187 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 FAM71F2Q6NXP2 309 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 OR4A4PQ8NGN8 299 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 LGALS14Q8TCE9 139 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 SLC23A1Q9UHI7 598 aa19.42■□□□□ 0.7
SDF2L1-201ENST00000248958 A0A075B6Q4 140 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 M0QZ24 198 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 DIRAS3O95661 229 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 FCGR3AP08637 254 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 SCTP09683 121 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 VSIG10L2P0DP72 767 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 TALDO1P37837 337 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 SERPINB10P48595 397 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 ABCA11PQ4W5N1 156 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 FBLN7Q53RD9 439 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 ODF3L1Q8IXM7 274 aa19.41■□□□□ 0.7
SDF2L1-201ENST00000248958 RAB29O14966 203 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 CEACAM6P40199 344 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 Q6ZS46 218 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 ZNF833PQ6ZTB9 187 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 PHF21AQ96BD5 680 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 EAF1Q96JC9 268 aaPredicted RBP19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 WNT10AQ9GZT5 417 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 RHBDL2Q9NX52 303 aa19.4■□□□□ 0.7
SDF2L1-201ENST00000248958 IGHV3-72A0A0B4J1Y9 119 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 MOSP00540 346 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 AMY1AP04745 511 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 AMY2AP04746 511 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 GSTP1P09211 210 aaKnown RBP19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 PITPNAQ00169 270 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 HNF4GQ14541 408 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 CDNFQ49AH0 187 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 Q6ZS49 121 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 OR8H1Q8NGG4 311 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 S1PR3Q99500 378 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 IFI27L2Q9H2X8 130 aa19.39■□□□□ 0.69
SDF2L1-201ENST00000248958 A0A0A6YYH2 397 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 A6NJ64 397 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 FABP7O15540 132 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 DTYMKP23919 212 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 TET2Q6N021 2002 aaPredicted RBP19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 Q8N6K4 173 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 C5orf56Q8N8D9 126 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 OR13F1Q8NGS4 319 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 FUNDC2Q9BWH2 189 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 TOLLIPQ9H0E2 274 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 SPATA2Q9UM82 520 aa19.38■□□□□ 0.69
SDF2L1-201ENST00000248958 SAA2-SAA4A0A096LPE2 208 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 ST8SIA5O15466 376 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 SAA2P0DJI9 122 aaPredicted RBP19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 LSAMPQ13449 338 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 PNLIPRP3Q17RR3 467 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 HACD4Q5VWC8 232 aa19.37■□□□□ 0.69
SDF2L1-201ENST00000248958 CABLES2Q9BTV7 478 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms