RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PGA5P0DJD9 388 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 HIST1H1BP16401 226 aaKnown RBP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 BTF3P20290 206 aaKnown RBP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 MRPL49Q13405 166 aaKnown RBP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 ICAM4Q14773 271 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 IZUMO4Q1ZYL8 232 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 ZNF766Q5HY98 468 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 RBMXL1Q96E39 390 aaKnown RBP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 OR2J1Q9GZK6 312 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 ZDHHC11Q9H8X9 412 aa18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 MBNL3Q9NUK0 354 aaKnown RBP18.3■□□□□ 0.52
SH2D3A-201ENST00000245908 A0A1B0GV90 55 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 SCAF4O95104 1147 aaKnown RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 IFNA5P01569 189 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 IGKV1-5P01602 117 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 RPS23P62266 143 aaKnown RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 TMEM267Q0VDI3 215 aaPredicted RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 ZNF146Q15072 292 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 HAGHQ16775 308 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 HES3Q5TGS1 186 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 WDFY4Q6ZS81 3184 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 REC114Q7Z4M0 266 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 GMPPAQ96IJ6 420 aaPredicted RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 PPP1R3CQ9UQK1 317 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 WIPI2Q9Y4P8 454 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 OR2C1O95371 312 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 HSPB1P04792 205 aaKnown RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 CD200P41217 278 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 P4HA3Q7Z4N8 544 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 PRR18Q8N4B5 295 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 CDH20Q9HBT6 801 aa18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 LIN7CQ9NUP9 197 aaKnown RBP18.29■□□□□ 0.52
SH2D3A-201ENST00000245908 MUC3AQ02505 3323 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 SLC31A2O15432 143 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 SYNGR2O43760 224 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 CD81P60033 236 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 ZNF585BQ52M93 769 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 ATP1A1-AS1Q5TC04 95 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 CLDND2Q8NHS1 167 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 IFNA10P01566 189 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 ARG2P78540 354 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 CDPF1Q6NVV7 123 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 THNSL2Q86YJ6 484 aa18.28■□□□□ 0.52
SH2D3A-201ENST00000245908 TRAV1-1A0A0B4J248 108 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 H3BQ15 152 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 NXPH2O95156 264 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 RAC2P15153 192 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 IDH3GP51553 393 aaPredicted RBP18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 TAS2R60P59551 318 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 ERVS71-1P61550 626 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 GABRA6Q16445 453 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 TMEM178AQ8NBL3 297 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 KCNS2Q9ULS6 477 aa18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 RBM7Q9Y580 266 aaKnown RBP18.27■□□□□ 0.52
SH2D3A-201ENST00000245908 IQCF6A8MYZ5 107 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 SEC14L6B5MCN3 397 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 CDIPTO14735 213 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 SH2D1BO14796 132 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 IGHV1-2P23083 117 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 RPS10P46783 165 aaKnown RBP18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 UBE2NP61088 152 aaKnown RBP18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 SLC25A40Q8TBP6 338 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 RHOVQ96L33 236 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 DOK5Q9P104 306 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 M0R296 226 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 TGFBR3Q03167 851 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 ALKBH6Q3KRA9 238 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 SLC25A24Q6NUK1 477 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 MUCL1Q96DR8 90 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 PSENENQ9NZ42 101 aa18.26■□□□□ 0.51
SH2D3A-201ENST00000245908 IAPPP10997 89 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 NDUFA6P56556 154 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 UBALD1Q8TB05 177 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 TMEM210A6NLX4 147 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 CEACAM6P40199 344 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 KHDC3LQ587J8 217 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 DRAM1Q8N682 238 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 ZNF525Q8N782 197 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 RAB39BQ96DA2 213 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 GPR179Q6PRD1 2367 aa18.25■□□□□ 0.51
SH2D3A-201ENST00000245908 PKIAP61925 76 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 CYB561D1Q8N8Q1 229 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 ZNF610Q8N9Z0 462 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 S100PBPQ96BU1 408 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 TMEM9BQ9NQ34 198 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 A0A087WWC5 75 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 WDR1O75083 606 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 SELEP16581 610 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 ZNF16P17020 682 aaPredicted RBP18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 ARL16Q0P5N6 197 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 PSG7Q13046 419 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 HAPLN4Q86UW8 402 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 ZNF429Q86V71 674 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 SCGB1C1Q8TD33 95 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 PSMG3Q9BT73 122 aaPredicted RBP18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 HES4Q9HCC6 221 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 CLCF1Q9UBD9 225 aa18.24■□□□□ 0.51
SH2D3A-201ENST00000245908 KNTC1P50748 2209 aa18.23■□□□□ 0.51
SH2D3A-201ENST00000245908 LOC102723971A0A1B0GUV8 181 aa18.23■□□□□ 0.51
SH2D3A-201ENST00000245908 H0YL77 283 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms