RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 MAFAQ8NHW3 353 aaPredicted RBP17.21■□□□□ 0.35
SOX4-201ENST00000244745 GAMTQ14353 236 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 C19orf48Q6RUI8 117 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 TMEM252Q8N6L7 170 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 ZNF738Q8NE65 137 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 CTHRC1Q96CG8 243 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 RNF2Q99496 336 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 TMEM222Q9H0R3 208 aa17.21■□□□□ 0.34
SOX4-201ENST00000244745 SEBOXQ9HB31 216 aaPredicted RBP17.2■□□□□ 0.34
SOX4-201ENST00000244745 SLC2A8Q9NY64 477 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 CYB5R2Q6BCY4 276 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 GLRX2Q9NS18 164 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 COL10A1Q03692 680 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 BPIFA4PQ86YQ2 179 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 C17orf51A8MQB3 221 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 PCP4P48539 62 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 TEX30Q5JUR7 227 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 ANKRD36A6QL64 1941 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 ATG2BQ96BY7 2078 aa17.2■□□□□ 0.34
SOX4-201ENST00000244745 KLK10O43240 276 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 BRS3P32247 399 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 CEACAM21Q3KPI0 293 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 DEFB124Q8NES8 71 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 TMEM74BQ9NUR3 256 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 CARHSP1Q9Y2V2 147 aaKnown RBP17.19■□□□□ 0.34
SOX4-201ENST00000244745 PATJQ8NI35 1801 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 H0Y980 276 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 CXorf66Q5JRM2 361 aaPredicted RBP17.19■□□□□ 0.34
SOX4-201ENST00000244745 SMRP1Q8NCR6 262 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 DPF1Q92782 380 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 NEUROG3Q9Y4Z2 214 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 LINC00587B1AMM8 73 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 GPHA2Q96T91 129 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 A0A0G2JK05 382 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 RND3P61587 244 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 IGHV1-45A0A0A0MS14 117 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 CD8AP01732 235 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 TMEM108Q6UXF1 575 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 ZBTB34Q8NCN2 500 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 OR52L2PQ8NGH6 319 aa17.19■□□□□ 0.34
SOX4-201ENST00000244745 A0A1W2PPE3 182 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 TMEM210A6NLX4 147 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 CD74P04233 296 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 ADRA2AP08913 450 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 TAS2R60P59551 318 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 EGR4Q05215 589 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 OR2J1Q9GZK6 312 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 ZNF665Q9H7R5 613 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 PRRX1P54821 245 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 FGF12P61328 243 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 HSPB8Q9UJY1 196 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 WDFY1Q8IWB7 410 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 SELENOHQ8IZQ5 122 aaKnown RBP17.18■□□□□ 0.34
SOX4-201ENST00000244745 CLEC1BQ9P126 229 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 LRRC37A2A6NM11 1700 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
SOX4-201ENST00000244745 PATE3B3GLJ2 98 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 SMIM17P0DL12 118 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 S100A4P26447 101 aaKnown RBP17.18■□□□□ 0.34
SOX4-201ENST00000244745 OR2D3Q8NGH3 330 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 IFITM10A6NMD0 228 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 ZNF600Q6ZNG1 722 aa17.18■□□□□ 0.34
SOX4-201ENST00000244745 BRCA1P38398 1863 aaKnown RBP17.17■□□□□ 0.34
SOX4-201ENST00000244745 DNPH1O43598 174 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 P01737 135 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 DANCRP0C864 163 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 LINC00469Q8N7U9 141 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 WFIKKN1Q96NZ8 548 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 TTTY12Q9BZ98 90 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 DUSP15Q9H1R2 295 aaPredicted RBP17.17■□□□□ 0.34
SOX4-201ENST00000244745 NYNRINQ9P2P1 1898 aaKnown RBP17.17■□□□□ 0.34
SOX4-201ENST00000244745 GZMHP20718 246 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 RHBDL1O75783 438 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 EFNB1P98172 346 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 TEPPQ6URK8 271 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
SOX4-201ENST00000244745 IGHMP01871 453 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 IFI6P09912 130 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 C2orf68Q2NKX9 166 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 KCNMB2Q9Y691 235 aa17.17■□□□□ 0.34
SOX4-201ENST00000244745 FHITP49789 147 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 SERF2P84101 59 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 C10orf113Q5VZT2 155 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 LRRC75AQ8NAA5 344 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 TP53RKQ96S44 253 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 CISD1Q9NZ45 108 aaKnown RBP17.16■□□□□ 0.34
SOX4-201ENST00000244745 GLIPR1P48060 266 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 FLYWCH2Q96CP2 140 aaKnown RBP17.16■□□□□ 0.34
SOX4-201ENST00000244745 ATG101Q9BSB4 218 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 TUBD1Q9UJT1 453 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 RAB29O14966 203 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 PPIHO43447 177 aaKnown RBP17.16■□□□□ 0.34
SOX4-201ENST00000244745 SYNGR1O43759 233 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 SMPD2O60906 423 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 WNT5AP41221 380 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 GABRA6Q16445 453 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 FBXW9Q5XUX1 488 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 TPRX1Q8N7U7 411 aa17.16■□□□□ 0.34
SOX4-201ENST00000244745 OR4B1Q8NGF8 309 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms