RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 IFNA5P01569 189 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 S100A2P29034 98 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 NDUFA6P56556 154 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF766Q5HY98 468 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF506Q5JVG8 444 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 DEFB124Q8NES8 71 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 RAB39BQ96DA2 213 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 YPEL4Q96NS1 127 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 PFDN5Q99471 154 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 RSG1Q9BU20 258 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 CHD3Q12873 2000 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 TRGV5A0A0B4J1U4 118 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 CDIPTO14735 213 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 SYNGR2O43760 224 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 HBE1P02100 147 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 HSPB1P04792 205 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 ERVK11-1P61568 191 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 PPP1CBP62140 327 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 OR2B11Q5JQS5 317 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 DPPA3Q6W0C5 159 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 HEPN1Q6WQI6 88 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 RBMXL1Q96E39 390 aaKnown RBP12.16□□□□□ -0.46
HIF3A-202ENST00000244303 MMP24Q9Y5R2 645 aa12.16□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF727A8MUV8 499 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 WDR1O75083 606 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 NXPH2O95156 264 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 METTL15P1P0C7V9 234 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 MAS1LP35410 378 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF674Q2M3X9 581 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF585BQ52M93 769 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 TMPRSS7Q7RTY8 843 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 Q8IYB0 196 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 PSENENQ9NZ42 101 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 POLDIP2Q9Y2S7 368 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.46
HIF3A-202ENST00000244303 SPAARA0A1B0GVQ0 90 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 PGA5P0DJD9 388 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 SELEP16581 610 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 CD82P27701 267 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 SOX8P57073 446 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 UBE2KP61086 200 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 ATXN7O15265 892 aaPredicted RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 FTH1P19P0C7X4 201 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 HOXA5P20719 270 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 CEACAM6P40199 344 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 DLK1P80370 383 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 C9orf152Q5JTZ5 239 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF600Q6ZNG1 722 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 VSIRQ9H7M9 311 aa12.14□□□□□ -0.47
HIF3A-202ENST00000244303 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 PRRC2CQ9Y520 2896 aaKnown RBP12.14□□□□□ -0.47
HIF3A-202ENST00000244303 NKX2-8O15522 239 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 GRPP07492 148 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 CEBPDP49716 269 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 SRSF6Q13247 344 aaKnown RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 MRPL49Q13405 166 aaKnown RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF146Q15072 292 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 HAPLN4Q86UW8 402 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 DRAM1Q8N682 238 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 TMEM178AQ8NBL3 297 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 SCGB1C1Q8TD33 95 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 OR14J1Q9UGF5 321 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 WIPI2Q9Y4P8 454 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 J3QW42 95 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 SH2D1BO14796 132 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 LYZL6O75951 148 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 PMP22Q01453 160 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 KHDC3LQ587J8 217 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 NIPSNAP3BQ9BS92 247 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
HIF3A-202ENST00000244303 SPENQ96T58 3664 aaKnown RBP12.13□□□□□ -0.47
HIF3A-202ENST00000244303 LOC400499M0QZD8 3231 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 TRAV1-1A0A0B4J248 108 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 TNFSF10P50591 281 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 UBE2NP61088 152 aaKnown RBP12.12□□□□□ -0.47
HIF3A-202ENST00000244303 GCNT2Q8N0V5 402 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 TVP23CQ96ET8 276 aa12.12□□□□□ -0.47
HIF3A-202ENST00000244303 ZDHHC11Q9H8X9 412 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms