RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 OR11L1Q8NGX0 322 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 OR10Z1Q8NGY1 313 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
CXCR4-201ENST00000241393 TCEAL3Q969E4 200 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 CABLES2Q9BTV7 478 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 PBDC1Q9BVG4 233 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 SMIM3Q9BZL3 60 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 ARRDC1-AS1Q9H2J1 176 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 PLEKHF2Q9H8W4 249 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 WFDC1Q9HC57 220 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 MTCH1Q9NZJ7 389 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 CACFD1Q9UGQ2 172 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF175Q9Y473 711 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 VCANP13611 3396 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 A0A1W2PNU3 283 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 LNP1A1A4G5 178 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 BTBD17A6NE02 478 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 SLC22A20A6NK97 555 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 LINC01548A6NM66 108 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 FAM166BA8MTA8 275 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 J3QT63 122 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 DEGS1O15121 323 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 F10P00742 488 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 OR8U9P0C7N5 309 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 SP9P0CG40 484 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 FOLR2P14207 255 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 CCNOP22674 350 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 CD80P33681 288 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 MDH2P40926 338 aaKnown RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 NPBWR1P48145 328 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 CAMLGP49069 296 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 SLC10A1Q14973 349 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 HERPUD1Q15011 391 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 NMSQ5H8A3 153 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 NUFIP2Q7Z417 695 aaKnown RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 Q8IYB0 196 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 SELENOHQ8IZQ5 122 aaKnown RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 OR1K1Q8NGR3 316 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 OR8U1Q8NH10 309 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 BCL2L2Q92843 193 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 HES7Q9BYE0 225 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 HIPK2Q9H2X6 1198 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 TMEM231Q9H6L2 316 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 TUBA4BQ9H853 241 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 SMCO4Q9NRQ5 59 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 C19orf12Q9NSK7 152 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
CXCR4-201ENST00000241393 PPP1R14DQ9NXH3 145 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 MLXQ9UH92 298 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 FAM96BQ9Y3D0 163 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 TECTAO75443 2155 aa6.62□□□□□ -1.35
CXCR4-201ENST00000241393 NKX2-6A6NCS4 301 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 K7N7A8 449 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 HSPA12AO43301 675 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SCTP09683 121 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 FOXG1P55316 489 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 HLA-DRB3P79483 266 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 LPAL2Q16609 132 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 GUK1Q16774 197 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 MIDNQ504T8 468 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SPIN3Q5JUX0 258 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 FBXW9Q5XUX1 488 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 PCSK4Q6UW60 755 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 MEX3BQ6ZN04 569 aaKnown RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 CBLN2Q8IUK8 224 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 FAM58AQ8N1B3 248 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 GAPTQ8N292 157 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 C15orf54Q8N8G6 183 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SUMF2Q8NBJ7 301 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 MRPL30Q8TCC3 161 aaKnown RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 NEK7Q8TDX7 302 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SECTM1Q8WVN6 248 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SCRT1Q9BWW7 348 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 EGLN1Q9GZT9 426 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 OR51I2Q9H344 312 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 GLRX2Q9NS18 164 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 ZDBF2Q9HCK1 2354 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 IGKV1-6A0A0C4DH72 117 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 A0A1B0GU03 582 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 NPIPB5A8MRT5 1133 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 SYNGR1O43759 233 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 PLAUP00749 431 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 NGFP01138 241 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 PRKACAP17612 351 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 BMP5P22003 454 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 F2RP25116 425 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 WNT5AP41221 380 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 AVPI1Q5T686 147 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 C9orf135Q5VTT2 229 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF324BQ6AW86 544 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 DPPA3Q6W0C5 159 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 LINC00696Q6ZRV3 163 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 H1FOOQ8IZA3 346 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
CXCR4-201ENST00000241393 LILRB1Q8NHL6 650 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 GNPNAT1Q96EK6 184 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 BSCL2Q96G97 398 aaPredicted RBP6.61□□□□□ -1.35
CXCR4-201ENST00000241393 AKR1E2Q96JD6 320 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms