RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CD207Q9UJ71 328 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CDH23Q9H251 3354 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CEACAM3P40198 252 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
MSH2-201ENST00000233146 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 PHYHD1Q5SRE7 291 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 TMEFF1Q8IYR6 380 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 COX14Q96I36 57 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 INSL6Q9Y581 213 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 ATG2BQ96BY7 2078 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 OBSL1O75147 1896 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CPAMD8Q8IZJ3 1885 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 GAGE10A6NGK3 116 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 H3BP45 60 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 HCRTR1O43613 425 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CMPK1P30085 196 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 SELENOVP59797 346 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 GATSQ8NAP1 163 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 ZNF114Q8NC26 417 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 SLC25A40Q8TBP6 338 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 VSTM2LQ96N03 204 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 UBE2J1Q9Y385 318 aaPredicted RBP11.12□□□□□ -0.63
MSH2-201ENST00000233146 ARHGAP21Q5T5U3 1957 aa11.12□□□□□ -0.63
MSH2-201ENST00000233146 CGAP01215 116 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 CTSSP25774 331 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 PLA2G5P39877 138 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 FAM58AQ8N1B3 248 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 BORCS7Q96B45 105 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
MSH2-201ENST00000233146 HMGB3O15347 200 aaKnown RBP11.11□□□□□ -0.63
MSH2-201ENST00000233146 PAGE4O60829 102 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 S100GP29377 79 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 ZNF90Q03938 601 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 ARL16Q0P5N6 197 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 KISS1Q15726 138 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 PRTGQ2VWP7 1150 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 C12orf54Q6X4T0 127 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 LYRM4Q9HD34 91 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 LATO43561 262 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 HAND1O96004 215 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 TNFP01375 233 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 FUT6P51993 359 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 SGCBQ16585 318 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 FNDC7Q5VTL7 733 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 TMEM215Q68D42 235 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 SIGMAR1Q99720 223 aa11.11□□□□□ -0.63
MSH2-201ENST00000233146 TRBV9A0A0B4J1U6 114 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 MDFIC2A0A1B0GVS7 189 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 VDAC1P21796 283 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 IER3P46695 156 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 METAP1P53582 386 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 FOXL2P58012 376 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 RPS15AP62244 130 aaKnown RBP11.1□□□□□ -0.63
MSH2-201ENST00000233146 GNB1P62873 340 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 PDGFRLQ15198 375 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 C1orf122Q6ZSJ8 110 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 CYB5D2Q8WUJ1 264 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 TM4SF19Q96DZ7 209 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 MOB1AQ9H8S9 216 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 NPVFQ9HCQ7 196 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 SCN10AQ9Y5Y9 1956 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 UNC80Q8N2C7 3258 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 IGHMP01871 453 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 FRMD6-AS1P0C7T7 363 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 LINC00869P0C866 280 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 RAC3P60763 192 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 RNPS1Q15287 305 aaKnown RBP11.1□□□□□ -0.63
MSH2-201ENST00000233146 ZC2HC1AQ96GY0 325 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 GNB1LQ9BYB4 327 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 LHFPL6Q9Y693 200 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 GTF3C1Q12789 2109 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 MYO9BQ13459 2157 aa11.1□□□□□ -0.63
MSH2-201ENST00000233146 SMIM17P0DL12 118 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 LGALS4P56470 323 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 OR1D5P58170 312 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 BCORP1Q8N888 145 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 OR10V1Q8NGI7 309 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 GTSF1LQ9H1H1 148 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 PGPEP1LA6NFU8 196 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 C11orf94C9JXX5 98 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 TIMP3P35625 211 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 DMRTC1Q5HYR2 192 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 ZNF324BQ6AW86 544 aaPredicted RBP11.09□□□□□ -0.63
MSH2-201ENST00000233146 FAM19A2Q8N3H0 131 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 TSKUQ8WUA8 353 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 NAT6Q93015 286 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 SLC25A22Q9H936 323 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms