RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PECRQ9BY49 303 aa11□□□□□ -0.65
VEGFA-201ENST00000230480 PARP12Q9H0J9 701 aaKnown RBP11□□□□□ -0.65
VEGFA-201ENST00000230480 MMP28Q9H239 520 aa11□□□□□ -0.65
VEGFA-201ENST00000230480 TAF9BQ9HBM6 251 aa11□□□□□ -0.65
VEGFA-201ENST00000230480 ABCB10Q9NRK6 738 aa11□□□□□ -0.65
VEGFA-201ENST00000230480 ELF5Q9UKW6 265 aaPredicted RBP11□□□□□ -0.65
VEGFA-201ENST00000230480 HSF4Q9ULV5 492 aa11□□□□□ -0.65
VEGFA-201ENST00000230480 TRBV6-6A0A0A6YYG2 114 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 IGKV1-6A0A0C4DH72 117 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 CLPSL1A2RUU4 121 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 VEGFCP49767 419 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 VBP1P61758 197 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 RBM39Q14498 530 aaKnown RBP10.99□□□□□ -0.65
VEGFA-201ENST00000230480 CDK10Q15131 360 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 HIST2H2BDQ6DRA6 164 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 TMEM219Q86XT9 240 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 ODF3L1Q8IXM7 274 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 C8orf31Q8N9H6 132 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 OR52L2PQ8NGH6 319 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 OR5H6Q8NGV6 325 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 NEK7Q8TDX7 302 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
VEGFA-201ENST00000230480 LIN7BQ9HAP6 207 aa10.99□□□□□ -0.65
VEGFA-201ENST00000230480 GNG10P50151 68 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 NCS1P62166 190 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 BLCAPP62952 87 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
VEGFA-201ENST00000230480 MORN2Q502X0 79 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 GDPGP1Q6ZNW5 385 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 Q8N2B8 174 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 OR6F1Q8NGZ6 308 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 WFDC12Q8WWY7 111 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 ZNF702PQ9H963 129 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 RAB22AQ9UL26 194 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 TRAPPC2LQ9UL33 140 aa10.98□□□□□ -0.65
VEGFA-201ENST00000230480 IGKV1D-8A0A087WSZ0 117 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 LEUTXA8MZ59 168 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 SDCBPO00560 298 aaPredicted RBP10.97□□□□□ -0.65
VEGFA-201ENST00000230480 MFNGO00587 321 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 PDCD5O14737 125 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 PROP1O75360 226 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
VEGFA-201ENST00000230480 KIR2DS4P43632 304 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 ZFP69Q49AA0 526 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 SLC25A48Q6ZT89 311 aaKnown RBP10.97□□□□□ -0.65
VEGFA-201ENST00000230480 TPRA1Q86W33 373 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 OR10V1Q8NGI7 309 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 NEDD4LQ96PU5 975 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 Q9N2K0 584 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 SERTAD4Q9NUC0 356 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 SSR3Q9UNL2 185 aa10.97□□□□□ -0.65
VEGFA-201ENST00000230480 A0A075B6Q4 140 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 POM121CA8CG34 1229 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 CENPXA8MT69 81 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 ZNF736B4DX44 427 aaPredicted RBP10.96□□□□□ -0.65
VEGFA-201ENST00000230480 AIREO43918 545 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 RAB6AP20340 208 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 M6PRP20645 277 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 MYL9P24844 172 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 RPS19P39019 145 aaKnown RBP10.96□□□□□ -0.65
VEGFA-201ENST00000230480 ZNF137PP52743 207 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 PRRX1P54821 245 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 HERPUD1Q15011 391 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 TIMM50Q3ZCQ8 353 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 SFXN4Q6P4A7 337 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 Q6ZTK2 550 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 PTX4Q96A99 478 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 SLC25A38Q96DW6 304 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 CITED1Q99966 193 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 ZNF251Q9BRH9 671 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 URM1Q9BTM9 101 aaKnown RBP10.96□□□□□ -0.65
VEGFA-201ENST00000230480 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
VEGFA-201ENST00000230480 LOC100506127A0A0U1RQW1 187 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 TOR1AO14656 332 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 TIMM23O14925 209 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SCTP09683 121 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SPNP16150 400 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SOX6P35712 828 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 PPP1CCP36873 323 aaKnown RBP10.95□□□□□ -0.66
VEGFA-201ENST00000230480 MRPS15P82914 257 aaKnown RBP10.95□□□□□ -0.66
VEGFA-201ENST00000230480 HTD2P86397 168 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 MXD1Q05195 221 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 ZNF816Q0VGE8 651 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-201ENST00000230480 EBI3Q14213 229 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 Q3ZCU0 254 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SPANXN2Q5MJ10 180 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 LY6G6FQ5SQ64 297 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 DHRS7BQ6IAN0 325 aaPredicted RBP10.95□□□□□ -0.66
VEGFA-201ENST00000230480 CCDC190Q86UF4 302 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 SNX29P2Q8IUI4 249 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 DRAM1Q8N682 238 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 Q8N6K4 173 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 OR10R2Q8NGX6 335 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 KCTD7Q96MP8 289 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 AGMATQ9BSE5 352 aa10.95□□□□□ -0.66
VEGFA-201ENST00000230480 GON7Q9BXV9 100 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms