RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 PSENENQ9NZ42 101 aa13.77□□□□□ -0.21
LTBR-201ENST00000228918 KLF13Q9Y2Y9 288 aaPredicted RBP13.77□□□□□ -0.21
LTBR-201ENST00000228918 METTL15P1P0C7V9 234 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 ERVK11-1P61568 191 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 FBXW9Q5XUX1 488 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 CDPF1Q6NVV7 123 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 ZNF343Q6P1L6 599 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 HAPLN4Q86UW8 402 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 Q8IYB0 196 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 MDS2Q8NDY4 140 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 SCGB1C1Q8TD33 95 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 PSMG3Q9BT73 122 aaPredicted RBP13.76□□□□□ -0.21
LTBR-201ENST00000228918 PRDM13Q9H4Q3 707 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 SIRT7Q9NRC8 400 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 TRAPPC2LQ9UL33 140 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 KCNS2Q9ULS6 477 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 CXorf65A6NEN9 183 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 MPLP40238 635 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 CD200P41217 278 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 ZNF124Q15973 351 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 SCCPDHQ8NBX0 429 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 UBALD1Q8TB05 177 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 VSIRQ9H7M9 311 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 MUC3AQ02505 3323 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
LTBR-201ENST00000228918 A0A1B0GV90 55 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 CXCL1P09341 107 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 KIAA0141Q14154 515 aaPredicted RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 ZNF726P1Q15940 193 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 TBC1D28Q2M2D7 210 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 ZNF787Q6DD87 383 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 MYPOPQ86VE0 399 aaPredicted RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 MBNL3Q9NUK0 354 aaKnown RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 CISD1Q9NZ45 108 aaKnown RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 RNF150Q9ULK6 438 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 POLDIP2Q9Y2S7 368 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 KLRC4-KLRK1H3BQV0 150 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 J3QW42 95 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 ATXN7O15265 892 aaPredicted RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 BCL2P10415 239 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 ERVFRD-1P60508 538 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 TMEM164Q5U3C3 297 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 VASH2Q86V25 355 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 MBD3L1Q8WWY6 194 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 TMEM9BQ9NQ34 198 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 GAR1Q9NY12 217 aaKnown RBP13.75□□□□□ -0.21
LTBR-201ENST00000228918 COL6A3P12111 3177 aa13.75□□□□□ -0.21
LTBR-201ENST00000228918 CELSR3Q9NYQ7 3312 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 TECTAO75443 2155 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 SMPD2O60906 423 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 WDR1O75083 606 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 CELA3BP08861 270 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 HIST1H1BP16401 226 aaKnown RBP13.74□□□□□ -0.21
LTBR-201ENST00000228918 ZNF16P17020 682 aaPredicted RBP13.74□□□□□ -0.21
LTBR-201ENST00000228918 BTF3P20290 206 aaKnown RBP13.74□□□□□ -0.21
LTBR-201ENST00000228918 S100A2P29034 98 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 GLIPR1P48060 266 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 SLC10A1Q14973 349 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 LRRC75BQ2VPJ9 315 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 DRAM1Q8N682 238 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 WDYHV1Q96HA8 205 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 ARRDC1-AS1Q9H2J1 176 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 IL17BQ9UHF5 180 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 WIPI2Q9Y4P8 454 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 ZFP92A6NM28 416 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 HBG1P69891 147 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 HBG2P69892 147 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 ZNF146Q15072 292 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 ACSF3Q4G176 576 aaPredicted RBP13.74□□□□□ -0.21
LTBR-201ENST00000228918 SSX9Q7RTT3 188 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 SSX7Q7RTT5 188 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 RHOVQ96L33 236 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 OR2J1Q9GZK6 312 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 URGCP-MRPS24S4R325 110 aa13.74□□□□□ -0.21
LTBR-201ENST00000228918 RAB11AP62491 216 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 DNLZQ5SXM8 178 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 LCN15Q6UWW0 184 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 RCC1LQ96I51 464 aaKnown RBP13.73□□□□□ -0.21
LTBR-201ENST00000228918 PARD6GQ9BYG4 376 aaPredicted RBP13.73□□□□□ -0.21
LTBR-201ENST00000228918 DEFB127Q9H1M4 99 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 GFOD1Q9NXC2 390 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 SPRR3Q9UBC9 169 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 OR14J1Q9UGF5 321 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 LNP1A1A4G5 178 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 B4DEV8 164 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 CDIPTO14735 213 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 NXPH2O95156 264 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 CEACAM6P40199 344 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 PPP1CBP62140 327 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 SERF2P84101 59 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 ZNF674Q2M3X9 581 aa13.73□□□□□ -0.21
LTBR-201ENST00000228918 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.73□□□□□ -0.21
LTBR-201ENST00000228918 WDR61Q9GZS3 305 aaKnown RBP13.73□□□□□ -0.21
LTBR-201ENST00000228918 CHD3Q12873 2000 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms