RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CBR3O75828 277 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 TCL1AP56279 114 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 BAXQ07812 192 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 PIGYQ3MUY2 71 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 GAPTQ8N292 157 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 DERL1Q9BUN8 251 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 TP73-AS1Q9UF72 201 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 PPYP01298 95 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
PTPRA-201ENST00000216877 RAC2P15153 192 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 ANOS1P23352 680 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 NT5CQ8TCD5 201 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 SMIM12Q96EX1 92 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 SLC7A10Q9NS82 523 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 RNF114Q9Y508 228 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 CLDN1O95832 211 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 EFEMP2O95967 443 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 NRASP01111 189 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 KRASP01116 189 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 STUMQ69YW2 141 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 AGBL5Q8NDL9 886 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 OR4C12Q96R67 309 aa12.61□□□□□ -0.39
PTPRA-201ENST00000216877 CEACAM5P06731 702 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 GFRA1P56159 465 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 UBE2NP61088 152 aaKnown RBP12.6□□□□□ -0.39
PTPRA-201ENST00000216877 HBG1P69891 147 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 HBG2P69892 147 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 CST6Q15828 149 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 SRSF10O75494 262 aaKnown RBP12.6□□□□□ -0.39
PTPRA-201ENST00000216877 NUDT3O95989 172 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 DOK3Q7L591 496 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 OR10G9Q8NGN4 311 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 OR10G7Q8NGN6 311 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 TMEM222Q9H0R3 208 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 TGFBR3LH3BV60 316 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 SRPXP78539 464 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 SFTPA2Q8IWL1 248 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 OR52L2PQ8NGH6 319 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
PTPRA-201ENST00000216877 SERGEFQ9UGK8 458 aa12.6□□□□□ -0.39
PTPRA-201ENST00000216877 TRAV30A0A087WSZ9 112 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 FAM166BA8MTA8 275 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 NPIPB7O75200 414 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 NAPSAO96009 420 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 PPBPP02775 128 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 MPV17L2Q567V2 206 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 SVIPQ8NHG7 77 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 UHRF2Q96PU4 802 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 PCNX3Q9H6A9 2034 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 GAGE12BA1L429 117 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 EFNA3P52797 238 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 EIF3IQ13347 325 aaKnown RBP12.59□□□□□ -0.39
PTPRA-201ENST00000216877 MFAP5Q13361 173 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
PTPRA-201ENST00000216877 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 NUDT16L1Q9BRJ7 211 aaKnown RBP12.59□□□□□ -0.39
PTPRA-201ENST00000216877 CCL28Q9NRJ3 127 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 CLEC18AA5D8T8 446 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 SEMA4FO95754 770 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 DAP3P51398 398 aaKnown RBP12.59□□□□□ -0.39
PTPRA-201ENST00000216877 LCN2P80188 198 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 PLCXD2Q0VAA5 305 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 ZDHHC23Q8IYP9 409 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 RPP25LQ8N5L8 163 aaKnown RBP12.59□□□□□ -0.39
PTPRA-201ENST00000216877 CLEC18CQ8NCF0 446 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 HDAC8Q9BY41 377 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 ST3GAL6Q9Y274 331 aa12.59□□□□□ -0.39
PTPRA-201ENST00000216877 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 VDAC1P21796 283 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 MALLQ13021 153 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 ZNF776Q68DI1 518 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-201ENST00000216877 SERTAD4Q9NUC0 356 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 GPR179Q6PRD1 2367 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 OR7C2O60412 319 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 PLCXD3Q63HM9 321 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 OR2Y1Q8NGV0 311 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 OR2AE1Q8NHA4 323 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-201ENST00000216877 H0Y8X5 98 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 SPINK2P20155 84 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 ZNF501Q96CX3 271 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-201ENST00000216877 NAA38Q9BRA0 125 aaKnown RBP12.58□□□□□ -0.4
PTPRA-201ENST00000216877 TIMM29Q9BSF4 260 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 KIR3DX1Q9H7L2 352 aa12.58□□□□□ -0.4
PTPRA-201ENST00000216877 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
PTPRA-201ENST00000216877 APOA2P02652 100 aa12.57□□□□□ -0.4
PTPRA-201ENST00000216877 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
PTPRA-201ENST00000216877 SMIM10L1P0DMW3 83 aa12.57□□□□□ -0.4
PTPRA-201ENST00000216877 RPL15P61313 204 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms