RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Tm2d3Q8BJ83 261 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Plekha1Q8BUL6 383 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Rln3Q8CHK2 141 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Plekhf2Q91WB4 249 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Fyttd1Q91Z49 317 aaKnown RBP11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Gpx8Q9D7B7 209 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Mdp1Q9D967 164 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Neu3Q9JMH7 418 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Nubp2Q9R061 275 aa11.65□□□□□ -0.54
Rnf4-204ENSMUST00000182047 Olfr721-ps1A0A140T8T9 324 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Spink14B9EJP9 96 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 MpgQ04841 333 aaKnown RBP11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Thbs3Q05895 956 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 H2-T22Q31615 379 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Grb2Q60631 217 aaKnown RBP11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Foxb1Q64732 325 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Dact2Q7TN08 757 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tox4Q8BU11 619 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cd300eQ8K249 196 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Pla1aQ8VI78 456 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 HaghQ99KB8 309 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Wdr4Q9EP82 413 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 SelenofQ9ERR7 162 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 LitafQ9JLJ0 161 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ackr1Q9QUI6 334 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Trav8n-2A0A075B633 112 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fbxw27A0A1D5RLF0 466 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm10376D3YXI8 184 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm8225D3Z536 292 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm21721J3QMK7 227 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm10375L7N286 184 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Emg1O35130 244 aaKnown RBP11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Prss39O70169 367 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 SftpcP21841 193 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Lsm5P62322 91 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Kcnj3P63250 501 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r223Q5SSA0 361 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1131Q7TR45 309 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Sh2d7Q8BI17 458 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Zfp52Q8BJ45 724 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rps19bp1Q8C6B9 143 aaKnown RBP11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 C1ql2Q8CFR0 287 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 MynnQ99MD8 610 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Slc29a3Q99P65 475 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tmem50bQ9D1X9 158 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 1700001F09RikQ9DAR5 184 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Zfpl1Q9DB43 310 aa11.64□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ly6g6fB2RXM6 300 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Prrt2E9PUL5 346 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn2r60L7N2A1 853 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Kcng3P59053 433 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 SnrpeP62305 92 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Hist1h3aP68433 136 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Hist1h3bP84228 136 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Vmn1r15Q14C10 299 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Slc38a11Q3USY0 453 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Zfp819Q80V81 607 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tssk5Q8C1R0 372 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ubqln3Q8C5U9 658 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 YbeyQ8CAV0 164 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr794Q8VF26 320 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr279Q8VFD8 310 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cd209cQ91ZW9 178 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Mob1aQ921Y0 216 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Mrpl49Q9CQ40 166 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Hacd1Q9QY80 281 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm9047B9EJX3 177 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 1700015F17RikD3YUK8 150 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Fgf4P11403 202 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 FauP35545 74 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Lbx1P52955 282 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rsl1Q7M6Y1 485 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm17324Q8C6J8 137 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Dmrta1Q8CFG4 490 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Myct1Q8R411 188 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Asb13Q8VBX0 278 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tmem267Q8VDR5 215 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1138Q8VFQ9 311 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ndufa6Q9CQZ5 131 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Q9CWB7 115 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rtl8bQ9D1F0 113 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Tomm20Q9DCC8 145 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Nova1Q9JKN6 507 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1158A2BHP7 313 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm42791D3YYB5 209 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 4933408B17RikG3X9B4 273 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 AhsgP29699 345 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Pax9P47242 342 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Supt4h1aP63271 117 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Spatc1Q148B6 480 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gm14851Q5ERJ0 116 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Cyb561Q60720 250 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Iqcf4Q6P8Y2 204 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Rnf144bQ8BKD6 301 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Gpr89aQ8BS95 455 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Mrpl48Q8JZS9 211 aaKnown RBP11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Olfr1459Q8VFV9 307 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Neurl1Q923S6 574 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Ca15Q99N23 324 aa11.63□□□□□ -0.55
Rnf4-204ENSMUST00000182047 Washc3Q9CR27 194 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms