RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 N6amt1Q6SKR2 214 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Sec14l4Q8R0F9 403 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 CmblQ8R1G2 245 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vmn1r74Q8R290 304 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gipc3Q8R5M0 297 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr995Q8VF74 315 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr1240Q8VG73 314 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tmem126bQ9D1R1 230 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 C1galt1c1Q9JMG2 316 aa19.39■□□□□ 0.69
Scn1b-201ENSMUST00000098548 4930433I11RikA0A0U1RPT6 723 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ube2dnl2A2AFH2 155 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr623E9Q382 317 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Hist1h1dP43277 221 aaKnown RBP19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Pramel5Q7TPY4 500 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Lhfpl2Q8BGA2 222 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Klhdc3Q8VEM9 382 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Dram2Q9CR48 267 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Znf593Q9DB42 134 aaKnown RBP19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 HikeshiQ9DD02 197 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Hs3st3b1Q9QZS6 390 aa19.38■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr1109A2AT96 312 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm14597A2CFG5 200 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vmn2r80E9Q1L0 863 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Zfp961E9Q4R5 444 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm3727J3QM54 205 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm21789J3QMZ1 123 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm21870J3QPN2 123 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm21883J3QPV3 123 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Dkk1O54908 272 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Wdr1O88342 606 aaKnown RBP19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 P01804 111 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 AregP31955 248 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mesp1P97309 243 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr125Q14AJ9 320 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Nxt2Q3UNA4 142 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Prss43Q76HL1 382 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Zfp455Q7M6X9 461 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tmprss11gQ8BZ10 417 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr790Q8VGJ3 322 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Memo1Q91VH6 297 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 CsprsQ99388 208 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ufsp2Q99K23 461 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tmem37Q9JJV3 211 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Hacd1Q9QY80 281 aa19.37■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm21294A0A087WS79 222 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Htra4A2RT60 483 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 4930435E12RikA6X8Z9 381 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Arxes1C0HK79 180 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Arxes2C0HK80 180 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm21767J3QPV5 180 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tnfsf10P50592 291 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ccr8P56484 353 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Idh3gP70404 393 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm6760Q0ZNK3 87 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tex30Q3TUU5 225 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm12258Q5NC63 627 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tmem56Q8CGF5 276 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Snapc5Q8R2K7 98 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Yif1aQ91XB7 293 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Arrdc1Q99KN1 434 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Elp5Q99L85 300 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ms4a4dQ99N05 225 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mpc2Q9D023 127 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ttc32Q9DAC7 148 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vmn1r171Q9EPS6 316 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Plp2Q9R1Q7 152 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 FggyA2AJL3 552 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Rhox3gB9EJQ9 160 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Adamts17E9Q4D1 1122 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vmn2r58K7N6V2 862 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Prrt1O35449 306 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 AF067061O70616 171 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ntsr1O88319 424 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Hbb-bh1P04444 147 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tmem165P52875 323 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mrps21P58059 87 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Trav5d-4Q5R1F6 114 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 PcolceQ61398 468 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Fam234aQ8C0Z1 555 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Plcxd1Q8CHS4 345 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vmn1r37Q8R2E4 302 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Lingo1Q9D1T0 614 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 SrpxQ9R0M3 464 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 B3GNT2Q9Z222 397 aa19.36■□□□□ 0.69
Scn1b-201ENSMUST00000098548 4930402F06RikA2AUQ8 332 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm43720E0CXM8 267 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gfra3O35118 397 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 RrhO35214 337 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Saa2P05367 122 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ube2mP61082 183 aaKnown RBP19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mfsd9Q8C0T7 466 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Klf17Q8CFA7 341 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Slc24a4Q8CGQ8 622 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Krt33aQ8K0Y2 404 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Nsun5Q8K4F6 465 aaKnown RBP19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Eva1aQ91WM6 156 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Cx3cr1Q9Z0D9 354 aa19.35■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Trav5-1A0A075B5Z7 114 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr568E9Q554 313 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm3327F7C9A1 213 aa19.34■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms