RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Olfr593Q8VF28 327 aa8.54□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Lnx2Q91XL2 687 aa8.54□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gpx8Q9D7B7 209 aa8.54□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rpl7l1Q9D8M4 246 aaKnown RBP8.54□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ros1Q78DX7 2340 aa8.54□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr685A0A1L1SVG7 331 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn2r83E9Q0G7 864 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr248E9Q1L6 309 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Cd200O54901 278 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Saa2P05367 122 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Csn2P10598 231 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Smad4P97471 551 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rhox4gQ2MDF7 205 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rhox4dQ2MDG0 205 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Mrgprb2Q3KNA1 338 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rnf166Q3U9F6 237 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ceacam12Q3UKP4 300 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rhox4eQ504P9 205 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vrk3Q8K3G5 453 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 SccpdhQ8R127 429 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1038Q8VGS1 319 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ms4a8Q99N10 290 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Asb5Q9D1A4 329 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Tomm20Q9DCC8 145 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Mmp1aQ9EPL5 464 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr632Q9EPN9 317 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Hsd17b11Q9EQ06 298 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rhox4bQ9JI43 205 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Col6a6Q8C6K9 2265 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Tet2Q4JK59 1912 aaKnown RBP8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 E030025P04RikA2A6V5 185 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm4950D3YUM8 205 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm43191F6YIH5 235 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 IfnabL7MTU6 190 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 EnamO55196 1274 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Nkx2-1P50220 372 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Cpne4Q8BLR2 557 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Nmnat2Q8BNJ3 307 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm16503Q8C6M9 103 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 AmtQ8CFA2 403 aaKnown RBP8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Angptl6Q8R0Z6 457 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1411Q8VFC4 323 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ms4a4dQ99N05 225 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Mgst3Q9CPU4 153 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Spaca7Q9D2S4 182 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Wdr20Q9D5R2 567 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ppp1r1aQ9ERT9 171 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ankdd1aA0A1L1ST07 508 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Znf551B2RUI1 696 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr231E9Q0M4 307 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm15130F6PYN5 206 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn1r204I7HIK1 302 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr893K7N678 312 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Pnliprp2P17892 482 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Wbp1P97764 304 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Zfp872Q3UVL3 465 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Taar8bQ5QD06 344 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 SordQ64442 357 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr1341Q7TQV4 312 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rps19bp1Q8C6B9 143 aaKnown RBP8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Snapc5Q8R2K7 98 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ms4a6dQ99N07 247 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 TsfmQ9CZR8 324 aa8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 CsQ9CZU6 464 aaKnown RBP8.53□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Ccdc74aE9Q9U8 364 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 CtseP70269 397 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Trav8d-2Q5R1B6 112 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Klf2Q60843 354 aaKnown RBP8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr142Q60881 305 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Sp110Q8BVK9 445 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Fam169bQ8CHT6 337 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Scgb2b26Q8JZX1 112 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Vmn1r89Q8R256 316 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Lrrc61Q8R2R5 259 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr654Q8VF27 341 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr639Q8VGY8 316 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Eif1bQ9CXU9 113 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Rab32Q9CZE3 223 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Olfr934Q9EQ87 310 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Clec4eQ9R0Q8 214 aa8.52□□□□□ -1.04
Pcdh1-201ENSMUST00000057185 Gm14403A2BFU4 402 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 MscO88940 201 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Scd2P13011 358 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 PtgfrP43117 366 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Cdx2P43241 311 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Hist1h1dP43277 221 aaKnown RBP8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Polr2gP62488 172 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Tmem71Q149F5 287 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Lpar5Q149R9 372 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Prss38Q3UKY7 322 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Gpr135Q7TQP2 457 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Olfr923Q7TRB9 317 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 1810024B03RikQ8BWE1 200 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 B4galt7Q8R087 327 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Vmn1r36Q8R2E3 305 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Olfr339Q8VGK8 309 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 FrkQ922K9 512 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 DohhQ99LN9 302 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Rpp14Q9CQH8 122 aa8.52□□□□□ -1.05
Pcdh1-201ENSMUST00000057185 Washc3Q9CR27 194 aa8.52□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms