RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Rab40cQ8VHQ4 281 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 4933400A11RikQ9CR52 288 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Birc7A2AWP0 285 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm4175D3YTW8 314 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm8677K9J7G9 307 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mesp2O08574 370 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 JPT1P97825 154 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Faap20Q3UN58 186 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Slc38a11Q3USY0 453 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 LssQ8BLN5 733 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Exosc6Q8BTW3 273 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr95Q8VFE2 312 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Kiss1rQ91V45 396 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mtfp1Q9CRB8 166 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Syt6Q9R0N8 511 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ighv1-13A0A075B5I0 98 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mef2bO55087 349 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tgfbr3O88393 850 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 CtsaP16675 474 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Q3U595 105 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mcrip1Q3UGS4 97 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Dhrs9Q58NB6 319 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Hes3Q61657 175 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem255aQ8BHW5 351 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm9881Q8BR56 211 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr830Q8VFJ5 315 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1443Q8VFW8 312 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr790Q8VGJ3 322 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr980Q8VH08 310 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Znf524Q9D0B1 321 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Plekha2Q9ERS5 425 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmprss2Q9JIQ8 490 aa9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Timm9Q9WV98 89 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ybx2Q9Z2C8 360 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Prob1A0A087WR45 1010 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm20815J3KMI0 227 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm20914J3QME2 227 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Isoc2aP85094 206 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm773Q3TML4 206 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm21292Q78EE2 227 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Cpeb3Q7TN99 716 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Igsf21Q7TNR6 468 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1474Q7TQQ8 314 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr222Q7TS30 318 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Fbxl2Q8BH16 423 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Vmn1r73Q8R293 303 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Pomt1Q8R2R1 746 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 9230110F15RikQ9D262 117 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ackr1Q9QUI6 334 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Alpk2Q91ZB0 2144 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zfp229E9PWT2 705 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lrp3E9Q1T6 790 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rabl2E9Q9D5 223 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 2010315B03RikJ3QK55 433 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 H2-LP01897 362 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gabra1P62812 455 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm7534Q3UU21 679 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Mfsd9Q8C0T7 466 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Vmn1r230Q8R2A2 316 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1453Q8VFX0 307 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tspan32Q9JHH2 256 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Akip1Q9JJR5 212 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Anxa10Q9QZ10 324 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm14409A2ARR8 349 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm11009F7CWA7 138 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Gm3486L7N2D0 199 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Dpagt1P42867 410 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lhx4P53776 390 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Slc35e3Q6PGC7 313 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zfp747Q8BHM7 422 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr113Q8VEU4 312 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr934Q9EQ87 310 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Clec6aQ9JKF4 209 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Esp6A8R0U0 136 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Sh2b3O09039 548 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Ifna6P07350 189 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 KhkP97328 298 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 ArsgQ3TYD4 525 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1386Q7TQT0 309 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr890Q7TRD9 314 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr137Q8VFC2 312 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Epdr1Q99M71 224 aa9.11□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tp53bp1P70399 1969 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 PikfyveQ9Z1T6 2097 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 GrprP21729 384 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Rnase11Q5GAM9 192 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 DbpQ60925 325 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zfp948Q6DFU8 667 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Olfr1086Q8VFL9 310 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Vkorc1Q9CRC0 161 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Adamtsl5D3Z689 485 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Klk1b3P00756 261 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 P01795 144 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Lgals3P16110 264 aaKnown RBP9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Pax2P32114 414 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Zc3h3Q8CHP0 950 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tmem41bQ8K1A5 291 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Hoxc12Q8K5B8 280 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Vmn1r193Q8R258 319 aa9.1□□□□□ -0.95
Ccdc40-201ENSMUST00000035935 Tm7sf3Q9CRG1 565 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms