RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 EGFEM1PQ0D2K5 195 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 GNMTQ14749 295 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 FAM27D1Q5T7N8 215 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 TRAT1Q6PIZ9 186 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 COMMD1Q8N668 190 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 NKAIN3Q8N8D7 197 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 S1PR3Q99500 378 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 HSPB9Q9BQS6 159 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 UQCC2Q9BRT2 126 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 TAF9BQ9HBM6 251 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 RAB9BQ9NP90 201 aa10.94□□□□□ -0.66
LINC00339-211ENST00000641009 TXNL1O43396 289 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 CA11O75493 328 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 RPLP1P05386 114 aaKnown RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 MAPK3P27361 379 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 GP2P55259 537 aaKnown RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 GPR50Q13585 617 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 DEFB121Q5J5C9 76 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 ZNF695Q8IW36 515 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 FAM71E2Q8N5Q1 922 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 OR52L2PQ8NGH6 319 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 MRPL30Q8TCC3 161 aaKnown RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 P2RX4Q99571 388 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 RASL11BQ9BPW5 248 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 OR2S2Q9NQN1 319 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 MBNL3Q9NUK0 354 aaKnown RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 FKBP14Q9NWM8 211 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 ERGIC3Q9Y282 383 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 CASQ2O14958 399 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-211ENST00000641009 PDCD6O75340 191 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 SLC6A1P30531 599 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 MYCNOSP40205 109 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 PNLIPRP3Q17RR3 467 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 MORN2Q502X0 79 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 ACSM3Q53FZ2 586 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 NKAPLQ5M9Q1 402 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 OR10K2Q6IF99 312 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 THRSPQ92748 146 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 DPF1Q92782 380 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 TMED9Q9BVK6 235 aa10.93□□□□□ -0.66
LINC00339-211ENST00000641009 GLAP06280 429 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 CDK1P06493 297 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 SLC2A2P11168 524 aaPredicted RBP10.92□□□□□ -0.66
LINC00339-211ENST00000641009 MYF6P23409 242 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 PPP1CCP36873 323 aaKnown RBP10.92□□□□□ -0.66
LINC00339-211ENST00000641009 RAB25P57735 213 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 LSAMPQ13449 338 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 STEAP3Q658P3 488 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 UNQ9370/PRO34162Q6UXP9 181 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 SULT4A1Q9BR01 284 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 ABHD14AQ9BUJ0 271 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 MND1Q9BWT6 205 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 GON7Q9BXV9 100 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 CST11Q9H112 138 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 KCNK15Q9H427 330 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 DCLRE1BQ9H816 532 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
LINC00339-211ENST00000641009 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 ERICH4A6NGS2 130 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 PTGES3LE9PB15 166 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 CCL24O00175 119 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 LANCL1O43813 399 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 VSIG8P0DPA2 414 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 CHATP28329 748 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 SOX6P35712 828 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 FOXE3Q13461 319 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 CXorf66Q5JRM2 361 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-211ENST00000641009 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
LINC00339-211ENST00000641009 LRRTM1Q86UE6 522 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 ODF3L1Q8IXM7 274 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 MCRIP2Q9BUT9 160 aaKnown RBP10.91□□□□□ -0.66
LINC00339-211ENST00000641009 JPT1Q9UK76 154 aa10.91□□□□□ -0.66
LINC00339-211ENST00000641009 H0YHG0 523 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 VDAC1P21796 283 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 HTD2P86397 168 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 CFHR3Q02985 330 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 MMDQ15546 238 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 GLT8D1Q68CQ7 371 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 ZNF554Q86TJ5 538 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 MS4A15Q8N5U1 240 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 RITA1Q96K30 269 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 NEDD4LQ96PU5 975 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 NICN1Q9BSH3 213 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 FAAP24Q9BTP7 215 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 MRPL20Q9BYC9 149 aaKnown RBP10.9□□□□□ -0.66
LINC00339-211ENST00000641009 LSM2Q9Y333 95 aaKnown RBP10.9□□□□□ -0.66
LINC00339-211ENST00000641009 TENM3Q9P273 2699 aa10.9□□□□□ -0.66
LINC00339-211ENST00000641009 YPEL1O60688 119 aa10.89□□□□□ -0.67
LINC00339-211ENST00000641009 IGHG4P01861 327 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms