RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 SRP14P37108 136 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 ARF1P84077 181 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SIGLEC14Q08ET2 396 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 HIST1H2BAQ96A08 127 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SAMD10Q9BYL1 202 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C12orf49Q9H741 205 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 PTPN13Q12923 2485 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C1QL1O75973 258 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 F2RP25116 425 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 GABRA2P47869 451 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF154Q13106 437 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 HABP2Q14520 560 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 PCOLCEQ15113 449 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TESK1Q15569 626 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 PDZD11Q5EBL8 140 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C1QL2Q7Z5L3 287 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 WDR31Q8NA23 367 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 RPUSD4Q96CM3 377 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 FAM208BQ5VWN6 2430 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 hCG_38984A0A1B0GV85 526 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 FAM24AA6NFZ4 105 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM210A6NLX4 147 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 FAM166BA8MTA8 275 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 HRASP01112 189 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 COX5BP10606 129 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 IAPPP10997 89 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 DAOP14920 347 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SLC16A13Q7RTY0 426 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 BATF2Q8N1L9 274 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 HSD17B10Q99714 261 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C1QTNF5Q9BXJ0 243 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 OR2D2Q9H210 308 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C5orf52A6NGY3 159 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 VSTM5A8MXK1 200 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 H0YIZ8 118 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 LTBRP36941 435 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 FHITP49789 147 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 OR11L1Q8NGX0 322 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SAP25Q8TEE9 199 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM45BQ96B21 275 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TXNDC17Q9BRA2 123 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 TIMM9Q9Y5J7 89 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 IGF2RP11717 2491 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 PSG4Q00888 419 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SDSLQ96GA7 329 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 LURAP1Q96LR2 239 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 Q9N2K0 584 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 P4HTMQ9NXG6 502 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 F6UZH7 168 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 ASCL1P50553 236 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C4orf17Q53FE4 359 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 ACY3Q96HD9 319 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 CYTL1Q9NRR1 136 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 OCIAD1Q9NX40 245 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 CTXND1A0A1B0GTU2 59 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 CDX1P47902 265 aaPredicted RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SLC10A1Q14973 349 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 Q6ZS49 121 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 MRGPRFQ96AM1 343 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 SOX7Q9BT81 388 aa4.8□□□□□ -1.64
SCN3A-210ENST00000640652 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 DSPP15924 2871 aaKnown RBP4.8□□□□□ -1.64
SCN3A-210ENST00000640652 C11orf94C9JXX5 98 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 TIAF1O95411 115 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 UCP1P25874 307 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 SRSF3P84103 164 aaKnown RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 TLN2Q9Y4G6 2542 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 A0A0J9YW62 118 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ZIC3O60481 467 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 CSRP2Q16527 193 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ZNF818PQ6ZRF7 136 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 SRXN1Q9BYN0 137 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 PKIBQ9C010 78 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 HEYLQ9NQ87 328 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 LRRC30A6NM36 301 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 KRASP01116 189 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 FBP1P09467 338 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 CA6P23280 308 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ACKR3P25106 362 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 CCKARP32238 428 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 THBS3P49746 956 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM242Q9NWH2 141 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 TMEM250H0YL14 139 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 CLN5O75503 358 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 WIPI1Q5MNZ9 446 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 OR5T1Q8NG75 326 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 WNT2BQ93097 391 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 GGACTQ9BVM4 153 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 PDGFBP01127 241 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ADCYAP1P18509 176 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 FAM209BQ5JX69 171 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
SCN3A-210ENST00000640652 WNT5BQ9H1J7 359 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 ATRXP46100 2492 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 COLCA2A8K830 154 aa4.79□□□□□ -1.64
SCN3A-210ENST00000640652 PSG2P11465 335 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms