RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	TFF1	P04155	84 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	MOGAT3	Q86VF5	341 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	RSRP1	Q9BUV0	290 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	REG4	Q9BYZ8	158 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	LIME1	Q9H400	295 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	SLC39A9	Q9NUM3	307 aa		6.6	□□□□□ -1.35
HNRNPU-223	ENST00000640001	UBE2L5P	A0A1B0GUS4	154 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	PROB1	E7EW31	1015 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001		M0R1X1	148 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	GAPDH	P04406	335 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	HOXD4	P09016	255 aa	Predicted RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	ATP6V0C	P27449	155 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	KLF3	P57682	345 aa	Predicted RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	RAB11A	P62491	216 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	TESK1	Q15569	626 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	HMGN3	Q15651	99 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	TLNRD1	Q9H1K6	362 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	RCC2	Q9P258	522 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	ANAPC10	Q9UM13	185 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	PRELID3B	Q9Y3B1	194 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	TRAV24	A0A0B4J272	114 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	SYNGR2	O43760	224 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	RPS23	P62266	143 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	COL10A1	Q03692	680 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	TLE1	Q04724	770 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	GABRA6	Q16445	453 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	AVPI1	Q5T686	147 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	DBX2	Q6ZNG2	339 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	OR8G5	Q8NG78	346 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	MRPL30	Q8TCC3	161 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	BSCL2	Q96G97	398 aa	Predicted RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	RAB40C	Q96S21	281 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	DMRTA2	Q96SC8	542 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	NRIP2	Q9BQI9	281 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	GFOD1	Q9NXC2	390 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	URGCP-MRPS24	S4R325	110 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	CAD	P27708	2225 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	TMEM210	A6NLX4	147 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001		H0Y980	276 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	HMGB3	O15347	200 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	CECR9	P0C854	216 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	SRSF4	Q08170	494 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	FOXF2	Q12947	444 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	ZNF273	Q14593	569 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	GFRAL	Q6UXV0	394 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	H1FX	Q92522	213 aa	Known RBP	6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	GPR146	Q96CH1	333 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	OR51I2	Q9H344	312 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	PARP11	Q9NR21	331 aa		6.59	□□□□□ -1.35
HNRNPU-223	ENST00000640001	ST8SIA5	O15466	376 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	FCGR3B	O75015	233 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	SEC11B	P0C7V7	166 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	G6PC	P35575	357 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	HOXA1	P49639	335 aa	Predicted RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	EIF2S3L	Q2VIR3	472 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	LHFPL5	Q8TAF8	219 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	PLPPR1	Q8TBJ4	325 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	SSC4D	Q8WTU2	575 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	GP6	Q9HCN6	339 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	CYTL1	Q9NRR1	136 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	AHRR	A9YTQ3	701 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	HBZ	P02008	142 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	DAO	P14920	347 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	TAGLN2	P37802	199 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	CASP6	P55212	293 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	SRSF3	P84103	164 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	ADAM5	Q6NVV9	412 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	COLCA1	Q6ZS62	124 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	CISD2	Q8N5K1	135 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	UBAC2	Q8NBM4	344 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	EDARADD	Q8WWZ3	215 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	MSI2	Q96DH6	328 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	ABHD14B	Q96IU4	210 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	NIPSNAP3B	Q9BS92	247 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	PARD6A	Q9NPB6	346 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	TUBD1	Q9UJT1	453 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	DOCK10	Q96BY6	2186 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	ESPL1	Q14674	2120 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	POLE	Q07864	2286 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	TRBV6-7	A0A0A0MS04	114 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	OOEP	A6NGQ2	149 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	CEACAM18	A8MTB9	384 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	RPS2	P15880	293 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	RPS10	P46783	165 aa	Known RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	NPBWR1	P48145	328 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	KCNJ3	P48549	501 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	ZNF787	Q6DD87	383 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	ASCL4	Q6XD76	172 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	OR10P1	Q8NGE3	313 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	FAM117A	Q9C073	453 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	RAB9B	Q9NP90	201 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	PCNX1	Q96RV3	2341 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	IGSF23	A1L1A6	192 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	SS18L1	O75177	396 aa	Predicted RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	GLIPR1	P48060	266 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	SLC38A11	Q08AI6	406 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	P2RY6	Q15077	328 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	PDLIM3	Q53GG5	364 aa	Predicted RBP	6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	OR5D13	Q8NGL4	314 aa		6.58	□□□□□ -1.36
HNRNPU-223	ENST00000640001	PLSCR2	Q9NRY7	297 aa		6.58	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms