RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MYOD1P15172 320 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 COX7A1P24310 79 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 CD40LGP29965 261 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ERVK-25P63136 954 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 STX3Q13277 289 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 MORN3Q6PF18 240 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ULK3Q6PHR2 472 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 Q6ZTC4 211 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 NFE4Q86UQ8 179 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 CYP4Z1Q86W10 505 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF440Q8IYI8 595 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 OR4A4PQ8NGN8 299 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SGTBQ96EQ0 304 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 GALNT14Q96FL9 552 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 CHMP6Q96FZ7 201 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 OPALINQ96PE5 141 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 FMO2Q99518 471 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SDR39U1Q9NRG7 319 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF229Q9UJW7 825 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SLC7A7Q9UM01 511 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 FAF1Q9UNN5 650 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF726A6NNF4 738 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 LEUTXA8MZ59 168 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 F5H5P2 479 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 RAB29O14966 203 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 OR2T1O43869 369 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SCN2BO60939 215 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 DIRAS1O95057 198 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 AHSA1O95433 338 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 MYL2P10916 166 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 PSMB6P28072 239 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 TSPAN5P62079 268 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
CCDC7-213ENST00000639290 FAM182AQ5T1J6 154 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SASS6Q6UVJ0 657 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 COMMD6Q7Z4G1 85 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 DHRSXQ8N5I4 330 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF781Q8N8C0 355 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 OR10H4Q8NGA5 316 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 KCTD7Q96MP8 289 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 LINC01600Q96MT4 127 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 CCL13Q99616 98 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 SIAEQ9HAT2 523 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 NMRAL1Q9HBL8 299 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 MSRB1Q9NZV6 116 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF221Q9UK13 617 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 NDUFAF1Q9Y375 327 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
CCDC7-213ENST00000639290 ITGB1BP1O14713 200 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 IGLV2-11P01706 119 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 NR2C1P13056 603 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 GDF5P43026 501 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 NCBP2P52298 156 aaKnown RBP eCLIP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 DLX1P56177 255 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 DLX6P56179 175 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 BASP1P80723 227 aaKnown RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 GTF2H2Q13888 395 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 EBI3Q14213 229 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 MS4A18Q3C1V0 323 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 C1orf140Q5VVS0 124 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 SUMO4Q6EEV6 95 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 C22orf42Q6IC83 251 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 GTF2H2CQ6P1K8 395 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 Q6ZRN7 208 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 HDDC2Q7Z4H3 204 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 CATSPERDQ86XM0 798 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 FAM216BQ8N7L0 139 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR10AD1Q8NGE0 317 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR4D6Q8NGJ1 314 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR6X1Q8NH79 312 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 CDC26Q8NHZ8 85 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 TSSK3Q96PN8 268 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 NEDD4LQ96PU5 975 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 NAPGQ99747 312 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 PAXXQ9BUH6 204 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 TSGA10Q9BZW7 698 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 WDR55Q9H6Y2 383 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 C12orf10Q9HB07 376 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 GLTPQ9NZD2 209 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 ELF5Q9UKW6 265 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 ACOT8O14734 319 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 ATP5HO75947 161 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 H2AFZP0C0S5 128 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 SLC1A2P43004 574 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 MRPL19P49406 292 aaKnown RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OXA1LQ15070 435 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 TP53I3Q53FA7 332 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 LDLRAD2Q5SZI1 272 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 C10orf128Q5T292 105 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 C19orf35Q6ZS72 473 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 H2AFVQ71UI9 128 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 SLC35D2Q76EJ3 337 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 SLC35F2Q8IXU6 374 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 FAM89BQ8N5H3 189 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 INO80EQ8NBZ0 244 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR4F6Q8NGB9 312 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR13A1Q8NGR1 328 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR2T11Q8NH01 316 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 ACTL9Q8TC94 416 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms