RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 OR5H6Q8NGV6 325 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 OR10X1Q8NGY0 326 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 RAB3CQ96E17 227 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 OR2S2Q9NQN1 319 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 MMP24Q9Y5R2 645 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 A0A075B6Q4 140 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 A0A1W2PPI3 338 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 CLPSL1A2RUU4 121 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 TSPAN9O75954 239 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 PPP1CCP36873 323 aaKnown RBP17.47■□□□□ 0.39
SCN1B-206ENST00000638536 CEACAM3P40198 252 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 REG1BP48304 166 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 KRTAP10-3P60369 221 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 MORN2Q502X0 79 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 LINC00311Q8N616 119 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 LGALS14Q8TCE9 139 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 RPEQ96AT9 228 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 CREB3L1Q96BA8 519 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 FUNDC2Q9BWH2 189 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 BEX1Q9HBH7 125 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 PKD1L1Q8TDX9 2849 aa17.47■□□□□ 0.39
SCN1B-206ENST00000638536 TRBV6-6A0A0A6YYG2 114 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 RPS19P39019 145 aaKnown RBP17.46■□□□□ 0.39
SCN1B-206ENST00000638536 MADCAM1Q13477 382 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 SLC25A48Q6ZT89 311 aaKnown RBP17.46■□□□□ 0.39
SCN1B-206ENST00000638536 ZNF554Q86TJ5 538 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 OR13F1Q8NGS4 319 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 TOMM40LQ969M1 308 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 PTX4Q96A99 478 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 CMSS1Q9BQ75 279 aaKnown RBP17.46■□□□□ 0.39
SCN1B-206ENST00000638536 ZNF747Q9BV97 191 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 ATG5Q9H1Y0 275 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 C16orf95Q9H693 158 aa17.46■□□□□ 0.39
SCN1B-206ENST00000638536 AMMECR1Q9Y4X0 333 aaPredicted RBP17.46■□□□□ 0.39
SCN1B-206ENST00000638536 MFNGO00587 321 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 TIMM23O14925 209 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 RANBP1P43487 201 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 IDNKQ5T6J7 187 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 Q6ZS46 218 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 C8orf31Q8N9H6 132 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 IL1F10Q8WWZ1 152 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 CFHR4Q92496 578 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 ST6GALNAC6Q969X2 333 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 GALMQ96C23 342 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 OCSTAMPQ9BR26 566 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 Q9N2K0 584 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 RNF114Q9Y508 228 aa17.45■□□□□ 0.38
SCN1B-206ENST00000638536 SCTP09683 121 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 HIST1H1DP16402 221 aaKnown RBP17.44■□□□□ 0.38
SCN1B-206ENST00000638536 HTD2P86397 168 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 TIMM50Q3ZCQ8 353 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 DRAM1Q8N682 238 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 OR56B4Q8NH76 319 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 NAA50Q9GZZ1 169 aaKnown RBP17.44■□□□□ 0.38
SCN1B-206ENST00000638536 PARP12Q9H0J9 701 aaKnown RBP17.44■□□□□ 0.38
SCN1B-206ENST00000638536 C12orf4Q9NQ89 552 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 WNK1Q9H4A3 2382 aa17.44■□□□□ 0.38
SCN1B-206ENST00000638536 HSD17B6O14756 317 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 PROK1P58294 105 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 NCS1P62166 190 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 HABP2Q14520 560 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-206ENST00000638536 LIAT1Q6ZQX7 453 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 RIMS4Q9H426 269 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-206ENST00000638536 RAB9BQ9NP90 201 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 JPT1Q9UK76 154 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 METTL21EPA6NDL7 271 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 FAM90A9PA6NNJ1 464 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 POM121CA8CG34 1229 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 OOSP1A8MZH6 123 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 HAX1O00165 279 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 BRS3P32247 399 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 BLCAPP62952 87 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 Q3ZCU0 254 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 WFDC12Q8WWY7 111 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 MAFIPQ8WZ33 124 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 SLC25A38Q96DW6 304 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 ZNF230Q9UIE0 474 aaPredicted RBP17.43■□□□□ 0.38
SCN1B-206ENST00000638536 PITPNC1Q9UKF7 332 aa17.43■□□□□ 0.38
SCN1B-206ENST00000638536 VWFP04275 2813 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 IGHV3-72A0A0B4J1Y9 119 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 IGKV1-6A0A0C4DH72 117 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 MNDAP41218 407 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 VBP1P61758 197 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 HLA-DRB3P79483 266 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 TMEM30BQ3MIR4 351 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 ODF3L1Q8IXM7 274 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 CAPSLQ8WWF8 208 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 ZNF702PQ9H963 129 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 RAB18Q9NP72 206 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 OR1A1Q9P1Q5 309 aa17.42■□□□□ 0.38
SCN1B-206ENST00000638536 IGHV1-3A0A0C4DH29 117 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 A0A1B0GUS0 222 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 YPEL1O60688 119 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 TFAP2AP05549 437 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 SNRNP70P08621 437 aaKnown RBP17.41■□□□□ 0.38
SCN1B-206ENST00000638536 KIR2DS4P43632 304 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 ZNF816Q0VGE8 651 aaPredicted RBP17.41■□□□□ 0.38
SCN1B-206ENST00000638536 CCDC144NLQ6NUI1 221 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 MOB1BQ7L9L4 216 aa17.41■□□□□ 0.38
SCN1B-206ENST00000638536 YPEL2Q96QA6 119 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms