RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OR4K15Q8NH41 348 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 PLEKHJ1Q9NW61 149 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 DKK4Q9UBT3 224 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 RELNP78509 3460 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 ADAP1O75689 374 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 LIPFP07098 398 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 METTL15P1P0C7V9 234 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 COMPP49747 757 aaPredicted RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 IL24Q13007 206 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 Q6ZS92 163 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 SLC25A26Q70HW3 274 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 SAT2Q96F10 170 aaPredicted RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 FAAP24Q9BTP7 215 aa9.84□□□□□ -0.83
CLN6-217ENST00000636964 FGF23Q9GZV9 251 aaPredicted RBP9.84□□□□□ -0.83
CLN6-217ENST00000636964 NCOR2Q9Y618 2525 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 GEMIN2O14893 280 aaKnown RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 NPBWR2P48146 333 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 TGFBR3Q03167 851 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 NSUN5P2Q63ZY6 315 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 OR2T2Q6IF00 324 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 FBXL14Q8N1E6 418 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 BEND2Q8NDZ0 799 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 OR10D4PQ8NGN7 298 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 NANOS1Q8WY41 292 aaKnown RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 DYRK2Q92630 601 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 AMDHD2Q9Y303 409 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 A8MWP6 167 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 PHOX2AO14813 284 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 AKR1C4P17516 323 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 CDX1P47902 265 aaPredicted RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 SULT1A1P50225 295 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 DVL1P1P54792 670 aaPredicted RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 ERVS71-1P61550 626 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 MEF2DQ14814 521 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 Q6ZT83 130 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 ZNF611Q8N823 705 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 ZNF610Q8N9Z0 462 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 LYPD6BQ8NI32 183 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 Q96M66 194 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.83□□□□□ -0.84
CLN6-217ENST00000636964 ZNF71Q9NQZ8 489 aaPredicted RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 ZNF701Q9NV72 531 aaPredicted RBP9.83□□□□□ -0.84
CLN6-217ENST00000636964 ZDHHC8Q9ULC8 765 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 IGF2RP11717 2491 aa9.83□□□□□ -0.84
CLN6-217ENST00000636964 CD300LBA8K4G0 201 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 FOXI3A8MTJ6 420 aaPredicted RBP9.82□□□□□ -0.84
CLN6-217ENST00000636964 SDCBPO00560 298 aaPredicted RBP9.82□□□□□ -0.84
CLN6-217ENST00000636964 TDGF1P3P51864 188 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 GABRA6Q16445 453 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 NCR3LG1Q68D85 454 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 STXBP6Q8NFX7 210 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 PHB2Q99623 299 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 IGHV3-64DA0A0J9YX35 117 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 MKRN2OSH3BPM6 223 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 GFRA3O60609 400 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 LYL1P12980 280 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 GUSBP1Q15486 140 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 SEM1Q6ZVN7 128 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 PEG10Q86TG7 708 aaKnown RBP9.82□□□□□ -0.84
CLN6-217ENST00000636964 SPACA3Q8IXA5 215 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 HPSE2Q8WWQ2 592 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 TM2D1Q9BX74 207 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 SLC2A8Q9NY64 477 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 ZNF732B4DXR9 585 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 HEPN1Q6WQI6 88 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 ZNF479Q96JC4 524 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 HS3ST6Q96QI5 342 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 CITED1Q99966 193 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 NMES1Q9C002 83 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 DNAJC4Q9NNZ3 241 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 ST3GAL6Q9Y274 331 aa9.82□□□□□ -0.84
CLN6-217ENST00000636964 PAX1P15863 534 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 AMY2BP19961 511 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 MAS1LP35410 378 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 SULT1A2P50226 295 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 RPS23P62266 143 aaKnown RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 ZNF616Q08AN1 781 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 TBC1D28Q2M2D7 210 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 TMEM268Q5VZI3 342 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 Q6ZRG5 221 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 C1QL4Q86Z23 238 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 OSR2Q8N2R0 312 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 CSNK2A3Q8NEV1 391 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 TMEM230Q96A57 120 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 OR10C1Q96KK4 312 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 DOK5Q9P104 306 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 ATRXP46100 2492 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 ADGRG4Q8IZF6 3080 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 IGKV1D-8A0A087WSZ0 117 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 DUS4LO95620 317 aaKnown RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 SOD3P08294 240 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 CA6P23280 308 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 OR2A2Q6IF42 318 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 ZDHHC23Q8IYP9 409 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 AQP10Q96PS8 301 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 OR2J1Q9GZK6 312 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 ZNF107Q9UII5 783 aaPredicted RBP9.81□□□□□ -0.84
CLN6-217ENST00000636964 KPTNQ9Y664 436 aa9.81□□□□□ -0.84
CLN6-217ENST00000636964 SERPINE3A8MV23 424 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms