RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NKX2-6A6NCS4 301 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 FAM24AA6NFZ4 105 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 PPP1R2P9O14990 202 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 CLDN14O95500 239 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 CCL2P13500 99 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 KLK2P20151 261 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 LMO1P25800 156 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF154Q13106 437 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF273Q14593 569 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF880Q6PDB4 577 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 MRGPRGQ86SM5 289 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 FDCSPQ8NFU4 85 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 S100PBPQ96BU1 408 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 RNF2Q99496 336 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 NARFLQ9H6Q4 476 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 IGKV1-27A0A075B6S5 117 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 M0R1B8 84 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 KLK10O43240 276 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 IGKV3-15P01624 115 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 POLR2GP62487 172 aaKnown RBP eCLIP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 HNF4GQ14541 408 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 IGSF11Q5DX21 431 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 FAM57AQ8TBR7 257 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 PCNPQ8WW12 178 aaKnown RBP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 HES7Q9BYE0 225 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 RNF24Q9Y225 148 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 KCNMB2Q9Y691 235 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 LRP4O75096 1905 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 HSPB6O14558 160 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 RPS2P15880 293 aaKnown RBP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 IGHV1-2P23083 117 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 PRDX2P32119 198 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 CFHR2P36980 270 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 AKR1D1P51857 326 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 UBE2KP61086 200 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 TNFAIP6P98066 277 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 LDLRAD3Q86YD5 345 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SFT2D1Q8WV19 159 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 TUBA4BQ9H853 241 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF729A6NN14 1252 aaPredicted RBP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 CHST1O43916 411 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 IFNA10P01566 189 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 FABP1P07148 127 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 EDDM3BP56851 147 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 TAS2R45P59539 299 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF497Q6ZNH5 498 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 OR2Z1Q8NG97 314 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 ESRP2Q9H6T0 727 aaKnown RBP3.88□□□□□ -1.79
SCN1A-210ENST00000635776 MANBALQ9NQG1 85 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 PPP1R3CQ9UQK1 317 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 A8MXE2 369 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SYNGR1O43759 233 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 WISP1O95388 367 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SCTP09683 121 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SPP1P10451 314 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 SPATA46Q5T0L3 261 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 MAGT1Q9H0U3 335 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 OR2D2Q9H210 308 aa3.88□□□□□ -1.79
SCN1A-210ENST00000635776 CXorf65A6NEN9 183 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 AGPAT2O15120 278 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 CEACAM4O75871 244 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 IGHV3-13P01766 116 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 NPBWR2P48146 333 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF787Q6DD87 383 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 KCNIP4Q6PIL6 250 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 Q6ZS92 163 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 VASH2Q86V25 355 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 DTD1Q8TEA8 209 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 CTDSP1Q9GZU7 261 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 PRNDQ9UKY0 176 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SMCO3A2RU48 225 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SNRNP70P08621 437 aaKnown RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 S100A2P29034 98 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 MEF2CQ06413 473 aaPredicted RBP3.87□□□□□ -1.79
SCN1A-210ENST00000635776 THNSL2Q86YJ6 484 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TVP23CQ96ET8 276 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 C14orf79Q96F83 325 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 FANCMQ8IYD8 2048 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SPCS3P61009 180 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 RNF212Q495C1 297 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ZNF818PQ6ZRF7 136 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SUMF1Q8NBK3 374 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 LHX4Q969G2 390 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TIMD4Q96H15 378 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SSX3Q99909 188 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 WIPF3A6NGB9 483 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 NDUFB3O43676 98 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ACTL6BO94805 426 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ATP6V0CP27449 155 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 MPV17P39210 176 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 PSG7Q13046 419 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 AKIRIN2Q53H80 203 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 LRRC10Q5BKY1 277 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 SPANXN5Q5MJ07 72 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 TMEM217Q8N7C4 229 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 OR10G4Q8NGN3 311 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 ARV1Q9H2C2 271 aa3.87□□□□□ -1.79
SCN1A-210ENST00000635776 CYTL1Q9NRR1 136 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms