RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 FAM53AQ6NSI3 398 aaPredicted RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 C5orf24Q7Z6I8 188 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 C8orf31Q8N9H6 132 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 OR5R1Q8NH85 324 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 OR1L1Q8NH94 360 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LGALS14Q8TCE9 139 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 AP3S1Q92572 193 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LEAP2Q969E1 77 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 RAB3CQ96E17 227 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 NXF2Q9GZY0 626 aaKnown RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 ATG5Q9H1Y0 275 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 MMP28Q9H239 520 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 MMP27Q9H306 513 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 RAB9BQ9NP90 201 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 GFOD1Q9NXC2 390 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 KCNIP1Q9NZI2 227 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 HILPDAQ9Y5L2 63 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 TMEM89A2RUT3 159 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 LEUTXA8MZ59 168 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 H3BUX3 64 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 MFNGO00587 321 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 EIF4EP06730 217 aaKnown RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 HKR1P10072 659 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 RAB13P51153 203 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 DYNLT3P51808 116 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 HMGN3Q15651 99 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 TMEM30BQ3MIR4 351 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 Q3ZCU0 254 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 RNASE12Q5GAN4 147 aaKnown RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 MZT2AQ6P582 158 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 CROCCP3Q8IVE0 287 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 SAMD12Q8N8I0 201 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 SPATA3Q8NHX4 192 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 CREB3L1Q96BA8 519 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 HDHD3Q9BSH5 251 aaPredicted RBP7.86□□□□□ -1.15
LINC00339-210ENST00000635675 MIXL1Q9H2W2 232 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 C12orf4Q9NQ89 552 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 VPREB3Q9UKI3 123 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 ETV7Q9Y603 341 aa7.86□□□□□ -1.15
LINC00339-210ENST00000635675 STAB1Q9NY15 2570 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 A0A075B6Q4 140 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 IGHV3-43A0A0B4J1X8 118 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 A0A1W2PPE3 182 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 BTBD17A6NE02 478 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 GPR137BO60478 399 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 IGHV3-43DP0DP04 118 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 HIST1H1DP16402 221 aaKnown RBP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 GNB3P16520 340 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 CEACAM3P40198 252 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF134P52741 427 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 RPL15P61313 204 aaKnown RBP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 HTD2P86397 168 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 MOB1BQ7L9L4 216 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 IZUMO1Q8IYV9 350 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 PRR18Q8N4B5 295 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 LINC00311Q8N616 119 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF439Q8NDP4 499 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 GCDHQ92947 438 aaPredicted RBP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 GALMQ96C23 342 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 CMSS1Q9BQ75 279 aaKnown RBP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 CHMP1AQ9HD42 196 aaPredicted RBP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 Q9N2K0 584 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 OR2S2Q9NQN1 319 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC00339-210ENST00000635675 RHBDL2Q9NX52 303 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 ABRACLQ9P1F3 81 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 GNG12Q9UBI6 72 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 SPATA2Q9UM82 520 aa7.85□□□□□ -1.15
LINC00339-210ENST00000635675 SERPINE3A8MV23 424 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 OOSP1A8MZH6 123 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 SCGNO76038 276 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 CD3GP09693 182 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 ELK1P19419 428 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 TNFSF8P32971 234 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 COMPP49747 757 aaPredicted RBP7.84□□□□□ -1.15
LINC00339-210ENST00000635675 GNG10P50151 68 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 ACTG1P63261 375 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 RELBQ01201 579 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 ZNF846Q147U1 533 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 ARL6IP1Q15041 203 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 CDNFQ49AH0 187 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 MORN2Q502X0 79 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 PLA1AQ53H76 456 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 CT45A1Q5HYN5 189 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 LY6G6FQ5SQ64 297 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 TPTE2P1Q5T6R2 138 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 STEAP3Q658P3 488 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 CNIH2Q6PI25 160 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 FAM131AQ6UXB0 335 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 SLC25A48Q6ZT89 311 aaKnown RBP7.84□□□□□ -1.15
LINC00339-210ENST00000635675 SNX29P2Q8IUI4 249 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 OR52L2PQ8NGH6 319 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 CT45A3Q8NHU0 189 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 SETD6Q8TBK2 473 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 TAF15Q92804 592 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC00339-210ENST00000635675 SLC25A38Q96DW6 304 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 DIRAS2Q96HU8 199 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 AKIP1Q9NQ31 210 aa7.84□□□□□ -1.15
LINC00339-210ENST00000635675 C1RLQ9NZP8 487 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms