RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CLN8Q9UBY8 286 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 PURGQ9UJV8 347 aaKnown RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 IGHV3-72A0A0B4J1Y9 119 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 UBE2L5PA0A1B0GUS4 154 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 FAM74A7A6NL05 159 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 J3QT63 122 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 PTBP3O95758 552 aaKnown RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 PAX6P26367 422 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 DYNLT3P51808 116 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 EIF5AP63241 154 aaKnown RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 FAM74A3Q4VXF1 159 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 RTL6Q6ICC9 239 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 FGFRL1Q8N441 504 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 LINC01560Q8TB33 94 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 TMEM204Q9BSN7 226 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 LRFN3Q9BTN0 628 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 TRAF4Q9BUZ4 470 aaPredicted RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 ASCL3Q9NQ33 180 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 OR2C3Q8N628 320 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 DHRS9Q9BPW9 319 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 PLEKHF2Q9H8W4 249 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 RNF122Q9H9V4 155 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 HEYLQ9NQ87 328 aaPredicted RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 MPC1Q9Y5U8 109 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 RRP8O43159 456 aaKnown RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 ATG12O94817 140 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 ARG1P05089 322 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 GPR12P47775 334 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 MECP2P51608 486 aaKnown RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 KLF3P57682 345 aaPredicted RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 BAXQ07812 192 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 TCF15Q12870 199 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 GABRA6Q16445 453 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 DUX4L9Q6RFH8 374 aaPredicted RBP6.37□□□□□ -1.39
PKP4-217ENST00000628904 Q6ZT83 130 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 NTNG2Q96CW9 530 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 KCNJ16Q9NPI9 418 aa6.37□□□□□ -1.39
PKP4-217ENST00000628904 HIVEP3Q5T1R4 2406 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 TNRC6AQ8NDV7 1962 aaKnown RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 ABCA12Q86UK0 2595 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 E5RGE8 158 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 HBZP02008 142 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 S100A6P06703 90 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 RPL23AP62750 156 aaKnown RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 TNFAIP6P98066 277 aaPredicted RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 SPRNQ5BIV9 151 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PRAMEF5Q5TYX0 476 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 H2BFWTQ7Z2G1 175 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 LURAP1LQ8IV03 231 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 FAM89BQ8N5H3 189 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PRR7Q8TB68 274 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PINX1Q96BK5 328 aaKnown RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 SPIN2AQ99865 258 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 SPIN2BQ9BPZ2 258 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PSENENQ9NZ42 101 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 WASF3Q9UPY6 502 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 ARHGAP32A7KAX9 2087 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PQLC2LA1A4F0 135 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 LRP5LA4QPB2 252 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 CRYM-AS1A6NIL9 109 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PRR33A8MZF0 331 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 SPINT2O43291 252 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 RAMP3O60896 148 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 HKR1P10072 659 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 CTSSP25774 331 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 UBE2G2P60604 165 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 SSTP61278 116 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 HERPUD1Q15011 391 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 EIF2S3LQ2VIR3 472 aaKnown RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 BVESQ8NE79 360 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 CLCC1Q96S66 551 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 Q9N2K0 584 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 FANCFQ9NPI8 374 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 FAM212BQ9NTI7 297 aaPredicted RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 SLC2A8Q9NY64 477 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 OR2W1Q9Y3N9 320 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 NCKAP5O14513 1909 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 IGHV3-21A0A0B4J1V1 117 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 CLEC18AA5D8T8 446 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 ZNF724A8MTY0 619 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 PGLYRP1O75594 196 aaPredicted RBP6.36□□□□□ -1.39
PKP4-217ENST00000628904 LY6DQ14210 128 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 RPL39P5Q59GN2 51 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 DBX2Q6ZNG2 339 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 WDR86Q86TI4 376 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 NECAP1Q8NC96 275 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 CLEC18CQ8NCF0 446 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 TLNRD1Q9H1K6 362 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 NPTNQ9Y639 398 aa6.36□□□□□ -1.39
PKP4-217ENST00000628904 AQP7O14520 342 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 TMEM127O75204 238 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 CLDN14O95500 239 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 CYC1P08574 325 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 RAB11AP62491 216 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 MPV17LQ2QL34 196 aa6.35□□□□□ -1.39
PKP4-217ENST00000628904 SMIM21Q3B7S5 101 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms